RNA–Protein interactions for RNA: ENST00000621189.4

RECQL4-210, Transcript of RecQ like helicase 4, humanhuman

TSL 1 (best) BASIC

Gene RECQL4, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-210ENST00000621189 MT1LQ93083 61 aa5.61□□□□□ -1.51
RECQL4-210ENST00000621189 MT1EP04732 61 aa5.56□□□□□ -1.52
RECQL4-210ENST00000621189 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
RECQL4-210ENST00000621189 LCE3BQ5TA77 95 aa5.54□□□□□ -1.52
RECQL4-210ENST00000621189 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
RECQL4-210ENST00000621189 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
RECQL4-210ENST00000621189 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
RECQL4-210ENST00000621189 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
RECQL4-210ENST00000621189 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
RECQL4-210ENST00000621189 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
RECQL4-210ENST00000621189 MT1MQ8N339 61 aa5.28□□□□□ -1.56
RECQL4-210ENST00000621189 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
RECQL4-210ENST00000621189 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
RECQL4-210ENST00000621189 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
RECQL4-210ENST00000621189 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
RECQL4-210ENST00000621189 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
RECQL4-210ENST00000621189 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
RECQL4-210ENST00000621189 SPRR2EP22531 72 aa5.07□□□□□ -1.6
RECQL4-210ENST00000621189 SPRR2BP35325 72 aa5.07□□□□□ -1.6
RECQL4-210ENST00000621189 SPRR2AP35326 72 aa5.07□□□□□ -1.6
RECQL4-210ENST00000621189 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
RECQL4-210ENST00000621189 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
RECQL4-210ENST00000621189 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
RECQL4-210ENST00000621189 PRM1P04553 51 aa4.9□□□□□ -1.63
RECQL4-210ENST00000621189 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
RECQL4-210ENST00000621189 SPRR2DP22532 72 aa4.82□□□□□ -1.64
RECQL4-210ENST00000621189 MDN1Q9NU22 5596 aa4.82□□□□□ -1.64
RECQL4-210ENST00000621189 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
RECQL4-210ENST00000621189 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
RECQL4-210ENST00000621189 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
RECQL4-210ENST00000621189 MT1AP04731 61 aa4.69□□□□□ -1.66
RECQL4-210ENST00000621189 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
RECQL4-210ENST00000621189 MT4P47944 62 aa4.53□□□□□ -1.68
RECQL4-210ENST00000621189 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
RECQL4-210ENST00000621189 MT3P25713 68 aa4.49□□□□□ -1.69
RECQL4-210ENST00000621189 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
RECQL4-210ENST00000621189 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
RECQL4-210ENST00000621189 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
RECQL4-210ENST00000621189 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
RECQL4-210ENST00000621189 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
RECQL4-210ENST00000621189 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
RECQL4-210ENST00000621189 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.74
RECQL4-210ENST00000621189 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
RECQL4-210ENST00000621189 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
RECQL4-210ENST00000621189 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
RECQL4-210ENST00000621189 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
RECQL4-210ENST00000621189 NEBP20929 6669 aa3.85□□□□□ -1.79
RECQL4-210ENST00000621189 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
RECQL4-210ENST00000621189 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
RECQL4-210ENST00000621189 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
RECQL4-210ENST00000621189 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
RECQL4-210ENST00000621189 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
RECQL4-210ENST00000621189 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
RECQL4-210ENST00000621189 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
RECQL4-210ENST00000621189 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
RECQL4-210ENST00000621189 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
RECQL4-210ENST00000621189 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
RECQL4-210ENST00000621189 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
RECQL4-210ENST00000621189 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
RECQL4-210ENST00000621189 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
RECQL4-210ENST00000621189 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
RECQL4-210ENST00000621189 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
RECQL4-210ENST00000621189 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
RECQL4-210ENST00000621189 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
RECQL4-210ENST00000621189 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
RECQL4-210ENST00000621189 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
RECQL4-210ENST00000621189 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
RECQL4-210ENST00000621189 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
RECQL4-210ENST00000621189 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
RECQL4-210ENST00000621189 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
RECQL4-210ENST00000621189 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
RECQL4-210ENST00000621189 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
RECQL4-210ENST00000621189 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
RECQL4-210ENST00000621189 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
RECQL4-210ENST00000621189 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
RECQL4-210ENST00000621189 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
RECQL4-210ENST00000621189 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 130.1 ms