RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 MT1LQ93083 61 aa4.18□□□□□ -1.74
COL1A2-213ENST00000620463 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
COL1A2-213ENST00000620463 KRTAP2-3P0C7H8 128 aa4.14□□□□□ -1.75
COL1A2-213ENST00000620463 KRTAP2-4Q9BYR9 128 aa4.14□□□□□ -1.75
COL1A2-213ENST00000620463 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
COL1A2-213ENST00000620463 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
COL1A2-213ENST00000620463 SPRR2DP22532 72 aa4.11□□□□□ -1.75
COL1A2-213ENST00000620463 MT1EP04732 61 aa4.07□□□□□ -1.76
COL1A2-213ENST00000620463 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
COL1A2-213ENST00000620463 LOC100996750A0A140TA64 210 aa4.04□□□□□ -1.76
COL1A2-213ENST00000620463 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
COL1A2-213ENST00000620463 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
COL1A2-213ENST00000620463 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
COL1A2-213ENST00000620463 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
COL1A2-213ENST00000620463 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
COL1A2-213ENST00000620463 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
COL1A2-213ENST00000620463 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
COL1A2-213ENST00000620463 MT1MQ8N339 61 aa3.91□□□□□ -1.78
COL1A2-213ENST00000620463 KRTAP9-6A0A140TA67 174 aa3.89□□□□□ -1.79
COL1A2-213ENST00000620463 USH2AO75445 5202 aa3.86□□□□□ -1.79
COL1A2-213ENST00000620463 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
COL1A2-213ENST00000620463 MT3P25713 68 aa3.74□□□□□ -1.81
COL1A2-213ENST00000620463 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
COL1A2-213ENST00000620463 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.81
COL1A2-213ENST00000620463 KMT2DO14686 5537 aa3.71□□□□□ -1.82
COL1A2-213ENST00000620463 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
COL1A2-213ENST00000620463 MT4P47944 62 aa3.69□□□□□ -1.82
COL1A2-213ENST00000620463 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
COL1A2-213ENST00000620463 MT1AP04731 61 aa3.65□□□□□ -1.83
COL1A2-213ENST00000620463 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.84
COL1A2-213ENST00000620463 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
COL1A2-213ENST00000620463 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
COL1A2-213ENST00000620463 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
COL1A2-213ENST00000620463 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
COL1A2-213ENST00000620463 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
COL1A2-213ENST00000620463 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
COL1A2-213ENST00000620463 MUC12Q9UKN1 5478 aa3.49□□□□□ -1.85
COL1A2-213ENST00000620463 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
COL1A2-213ENST00000620463 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
COL1A2-213ENST00000620463 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
COL1A2-213ENST00000620463 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
COL1A2-213ENST00000620463 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
COL1A2-213ENST00000620463 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
COL1A2-213ENST00000620463 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
COL1A2-213ENST00000620463 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
COL1A2-213ENST00000620463 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
COL1A2-213ENST00000620463 NEBP20929 6669 aa3.19□□□□□ -1.9
COL1A2-213ENST00000620463 KRTAP5-9P26371 169 aa3.15□□□□□ -1.9
COL1A2-213ENST00000620463 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
COL1A2-213ENST00000620463 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
COL1A2-213ENST00000620463 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
COL1A2-213ENST00000620463 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
COL1A2-213ENST00000620463 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
COL1A2-213ENST00000620463 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
COL1A2-213ENST00000620463 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
COL1A2-213ENST00000620463 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
COL1A2-213ENST00000620463 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
COL1A2-213ENST00000620463 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
COL1A2-213ENST00000620463 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
COL1A2-213ENST00000620463 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
COL1A2-213ENST00000620463 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
COL1A2-213ENST00000620463 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
COL1A2-213ENST00000620463 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
COL1A2-213ENST00000620463 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
COL1A2-213ENST00000620463 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
COL1A2-213ENST00000620463 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
COL1A2-213ENST00000620463 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
COL1A2-213ENST00000620463 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
COL1A2-213ENST00000620463 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
COL1A2-213ENST00000620463 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
COL1A2-213ENST00000620463 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
COL1A2-213ENST00000620463 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
COL1A2-213ENST00000620463 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
COL1A2-213ENST00000620463 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
COL1A2-213ENST00000620463 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
COL1A2-213ENST00000620463 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
COL1A2-213ENST00000620463 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 157.2 ms