RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
CYFIP1-211ENST00000619348 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
CYFIP1-211ENST00000619348 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
CYFIP1-211ENST00000619348 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CYFIP1-211ENST00000619348 MT1GP13640 62 aa4.42□□□□□ -1.7
CYFIP1-211ENST00000619348 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
CYFIP1-211ENST00000619348 MT1LQ93083 61 aa4.41□□□□□ -1.7
CYFIP1-211ENST00000619348 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
CYFIP1-211ENST00000619348 MT1EP04732 61 aa4.34□□□□□ -1.71
CYFIP1-211ENST00000619348 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
CYFIP1-211ENST00000619348 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
CYFIP1-211ENST00000619348 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
CYFIP1-211ENST00000619348 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
CYFIP1-211ENST00000619348 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CYFIP1-211ENST00000619348 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
CYFIP1-211ENST00000619348 MT1MQ8N339 61 aa4.08□□□□□ -1.76
CYFIP1-211ENST00000619348 KRTAP19-3Q7Z4W3 81 aa4.05□□□□□ -1.76
CYFIP1-211ENST00000619348 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CYFIP1-211ENST00000619348 PRM1P04553 51 aa3.94□□□□□ -1.78
CYFIP1-211ENST00000619348 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
CYFIP1-211ENST00000619348 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
CYFIP1-211ENST00000619348 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
CYFIP1-211ENST00000619348 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
CYFIP1-211ENST00000619348 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
CYFIP1-211ENST00000619348 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
CYFIP1-211ENST00000619348 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
CYFIP1-211ENST00000619348 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
CYFIP1-211ENST00000619348 MT1AP04731 61 aa3.65□□□□□ -1.83
CYFIP1-211ENST00000619348 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
CYFIP1-211ENST00000619348 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
CYFIP1-211ENST00000619348 SPRR2EP22531 72 aa3.58□□□□□ -1.84
CYFIP1-211ENST00000619348 SPRR2BP35325 72 aa3.58□□□□□ -1.84
CYFIP1-211ENST00000619348 SPRR2AP35326 72 aa3.58□□□□□ -1.84
CYFIP1-211ENST00000619348 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
CYFIP1-211ENST00000619348 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
CYFIP1-211ENST00000619348 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.86
CYFIP1-211ENST00000619348 MT3P25713 68 aa3.4□□□□□ -1.87
CYFIP1-211ENST00000619348 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
CYFIP1-211ENST00000619348 SPRR2DP22532 72 aa3.39□□□□□ -1.87
CYFIP1-211ENST00000619348 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
CYFIP1-211ENST00000619348 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
CYFIP1-211ENST00000619348 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
CYFIP1-211ENST00000619348 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
CYFIP1-211ENST00000619348 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
CYFIP1-211ENST00000619348 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
CYFIP1-211ENST00000619348 MT4P47944 62 aa3.2□□□□□ -1.9
CYFIP1-211ENST00000619348 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
CYFIP1-211ENST00000619348 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
CYFIP1-211ENST00000619348 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
CYFIP1-211ENST00000619348 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
CYFIP1-211ENST00000619348 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CYFIP1-211ENST00000619348 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
CYFIP1-211ENST00000619348 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CYFIP1-211ENST00000619348 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CYFIP1-211ENST00000619348 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
CYFIP1-211ENST00000619348 NEBP20929 6669 aa2.76□□□□□ -1.97
CYFIP1-211ENST00000619348 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
CYFIP1-211ENST00000619348 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CYFIP1-211ENST00000619348 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
CYFIP1-211ENST00000619348 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
CYFIP1-211ENST00000619348 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CYFIP1-211ENST00000619348 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CYFIP1-211ENST00000619348 KRTAP20-1Q3LI63 56 aa2.44□□□□□ -2.02
CYFIP1-211ENST00000619348 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
CYFIP1-211ENST00000619348 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
CYFIP1-211ENST00000619348 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CYFIP1-211ENST00000619348 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
CYFIP1-211ENST00000619348 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CYFIP1-211ENST00000619348 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
CYFIP1-211ENST00000619348 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
CYFIP1-211ENST00000619348 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
CYFIP1-211ENST00000619348 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CYFIP1-211ENST00000619348 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CYFIP1-211ENST00000619348 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CYFIP1-211ENST00000619348 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
CYFIP1-211ENST00000619348 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
CYFIP1-211ENST00000619348 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
CYFIP1-211ENST00000619348 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 838 ms