RNA–Protein interactions for RNA: ENST00000617806.4

BECN1-222, Transcript of beclin 1, humanhuman

TSL 5

Gene BECN1, Length 4,865 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-222ENST00000617806 FAT4Q6V0I7 4981 aa3.55□□□□□ -1.84
BECN1-222ENST00000617806 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
BECN1-222ENST00000617806 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
BECN1-222ENST00000617806 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
BECN1-222ENST00000617806 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
BECN1-222ENST00000617806 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
BECN1-222ENST00000617806 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
BECN1-222ENST00000617806 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
BECN1-222ENST00000617806 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
BECN1-222ENST00000617806 MT1MQ8N339 61 aa3.46□□□□□ -1.86
BECN1-222ENST00000617806 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
BECN1-222ENST00000617806 PRM1P04553 51 aa3.42□□□□□ -1.86
BECN1-222ENST00000617806 SPRR2DP22532 72 aa3.42□□□□□ -1.86
BECN1-222ENST00000617806 KRTAP4-9Q9BYQ8 210 aa3.33□□□□□ -1.88
BECN1-222ENST00000617806 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
BECN1-222ENST00000617806 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
BECN1-222ENST00000617806 LCE2DQ5TA82 110 aaPredicted RBP3.29□□□□□ -1.88
BECN1-222ENST00000617806 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
BECN1-222ENST00000617806 MT3P25713 68 aa3.25□□□□□ -1.89
BECN1-222ENST00000617806 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
BECN1-222ENST00000617806 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
BECN1-222ENST00000617806 MT1AP04731 61 aa3.2□□□□□ -1.9
BECN1-222ENST00000617806 KMT2DO14686 5537 aa3.18□□□□□ -1.9
BECN1-222ENST00000617806 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
BECN1-222ENST00000617806 USH2AO75445 5202 aa3.12□□□□□ -1.91
BECN1-222ENST00000617806 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
BECN1-222ENST00000617806 MT4P47944 62 aa3.09□□□□□ -1.91
BECN1-222ENST00000617806 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
BECN1-222ENST00000617806 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
BECN1-222ENST00000617806 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
BECN1-222ENST00000617806 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
BECN1-222ENST00000617806 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.92
BECN1-222ENST00000617806 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
BECN1-222ENST00000617806 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
BECN1-222ENST00000617806 MUC12Q9UKN1 5478 aa2.88□□□□□ -1.95
BECN1-222ENST00000617806 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
BECN1-222ENST00000617806 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
BECN1-222ENST00000617806 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
BECN1-222ENST00000617806 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
BECN1-222ENST00000617806 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
BECN1-222ENST00000617806 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
BECN1-222ENST00000617806 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
BECN1-222ENST00000617806 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
BECN1-222ENST00000617806 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
BECN1-222ENST00000617806 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
BECN1-222ENST00000617806 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
BECN1-222ENST00000617806 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
BECN1-222ENST00000617806 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
BECN1-222ENST00000617806 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
BECN1-222ENST00000617806 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
BECN1-222ENST00000617806 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
BECN1-222ENST00000617806 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
BECN1-222ENST00000617806 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
BECN1-222ENST00000617806 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
BECN1-222ENST00000617806 NEBP20929 6669 aa2.37□□□□□ -2.03
BECN1-222ENST00000617806 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
BECN1-222ENST00000617806 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
BECN1-222ENST00000617806 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.06
BECN1-222ENST00000617806 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
BECN1-222ENST00000617806 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
BECN1-222ENST00000617806 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
BECN1-222ENST00000617806 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
BECN1-222ENST00000617806 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
BECN1-222ENST00000617806 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
BECN1-222ENST00000617806 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
BECN1-222ENST00000617806 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
BECN1-222ENST00000617806 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.11
BECN1-222ENST00000617806 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
BECN1-222ENST00000617806 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
BECN1-222ENST00000617806 KRTAP5-1Q6L8H4 278 aa1.69□□□□□ -2.14
BECN1-222ENST00000617806 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
BECN1-222ENST00000617806 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
BECN1-222ENST00000617806 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
BECN1-222ENST00000617806 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
BECN1-222ENST00000617806 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
BECN1-222ENST00000617806 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
BECN1-222ENST00000617806 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
BECN1-222ENST00000617806 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms