RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
MTHFD1L-211ENST00000611279 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
MTHFD1L-211ENST00000611279 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
MTHFD1L-211ENST00000611279 MT1LQ93083 61 aa5.73□□□□□ -1.49
MTHFD1L-211ENST00000611279 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
MTHFD1L-211ENST00000611279 MT1GP13640 62 aa5.71□□□□□ -1.5
MTHFD1L-211ENST00000611279 MT1EP04732 61 aa5.63□□□□□ -1.51
MTHFD1L-211ENST00000611279 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
MTHFD1L-211ENST00000611279 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
MTHFD1L-211ENST00000611279 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
MTHFD1L-211ENST00000611279 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
MTHFD1L-211ENST00000611279 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
MTHFD1L-211ENST00000611279 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
MTHFD1L-211ENST00000611279 MT1MQ8N339 61 aa5.27□□□□□ -1.57
MTHFD1L-211ENST00000611279 LCE2DQ5TA82 110 aaPredicted RBP5.2□□□□□ -1.58
MTHFD1L-211ENST00000611279 KRTAP19-3Q7Z4W3 81 aa5.2□□□□□ -1.58
MTHFD1L-211ENST00000611279 PRM1P04553 51 aa5.18□□□□□ -1.58
MTHFD1L-211ENST00000611279 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
MTHFD1L-211ENST00000611279 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
MTHFD1L-211ENST00000611279 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
MTHFD1L-211ENST00000611279 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
MTHFD1L-211ENST00000611279 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
MTHFD1L-211ENST00000611279 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
MTHFD1L-211ENST00000611279 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
MTHFD1L-211ENST00000611279 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
MTHFD1L-211ENST00000611279 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
MTHFD1L-211ENST00000611279 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
MTHFD1L-211ENST00000611279 MT1AP04731 61 aa4.81□□□□□ -1.64
MTHFD1L-211ENST00000611279 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
MTHFD1L-211ENST00000611279 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
MTHFD1L-211ENST00000611279 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.67
MTHFD1L-211ENST00000611279 SPRR2EP22531 72 aa4.58□□□□□ -1.68
MTHFD1L-211ENST00000611279 SPRR2BP35325 72 aa4.58□□□□□ -1.68
MTHFD1L-211ENST00000611279 SPRR2AP35326 72 aa4.58□□□□□ -1.68
MTHFD1L-211ENST00000611279 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
MTHFD1L-211ENST00000611279 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
MTHFD1L-211ENST00000611279 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.7
MTHFD1L-211ENST00000611279 SPRR2DP22532 72 aa4.35□□□□□ -1.71
MTHFD1L-211ENST00000611279 MT3P25713 68 aa4.34□□□□□ -1.72
MTHFD1L-211ENST00000611279 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
MTHFD1L-211ENST00000611279 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
MTHFD1L-211ENST00000611279 MUC19Q7Z5P9 8384 aa4.3□□□□□ -1.72
MTHFD1L-211ENST00000611279 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
MTHFD1L-211ENST00000611279 MT4P47944 62 aa4.07□□□□□ -1.76
MTHFD1L-211ENST00000611279 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
MTHFD1L-211ENST00000611279 NEBP20929 6669 aa4□□□□□ -1.77
MTHFD1L-211ENST00000611279 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
MTHFD1L-211ENST00000611279 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
MTHFD1L-211ENST00000611279 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
MTHFD1L-211ENST00000611279 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
MTHFD1L-211ENST00000611279 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
MTHFD1L-211ENST00000611279 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
MTHFD1L-211ENST00000611279 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
MTHFD1L-211ENST00000611279 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
MTHFD1L-211ENST00000611279 LCE4AQ5TA78 99 aa3.46□□□□□ -1.85
MTHFD1L-211ENST00000611279 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
MTHFD1L-211ENST00000611279 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
MTHFD1L-211ENST00000611279 KRTAP5-3Q6L8H2 238 aa3.36□□□□□ -1.87
MTHFD1L-211ENST00000611279 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
MTHFD1L-211ENST00000611279 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
MTHFD1L-211ENST00000611279 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
MTHFD1L-211ENST00000611279 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
MTHFD1L-211ENST00000611279 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
MTHFD1L-211ENST00000611279 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
MTHFD1L-211ENST00000611279 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
MTHFD1L-211ENST00000611279 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
MTHFD1L-211ENST00000611279 KRTAP21-1Q3LI58 79 aa2.96□□□□□ -1.93
MTHFD1L-211ENST00000611279 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
MTHFD1L-211ENST00000611279 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
MTHFD1L-211ENST00000611279 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
MTHFD1L-211ENST00000611279 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
MTHFD1L-211ENST00000611279 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
MTHFD1L-211ENST00000611279 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
MTHFD1L-211ENST00000611279 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
MTHFD1L-211ENST00000611279 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
MTHFD1L-211ENST00000611279 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
MTHFD1L-211ENST00000611279 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.3 ms