RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 MUC12Q9UKN1 5478 aa8.09□□□□□ -1.11
UBE3C-209ENST00000611269 MT1EP04732 61 aa8.09□□□□□ -1.11
UBE3C-209ENST00000611269 MDN1Q9NU22 5596 aa7.97□□□□□ -1.13
UBE3C-209ENST00000611269 LCE1AQ5T7P2 110 aa7.91□□□□□ -1.14
UBE3C-209ENST00000611269 SPRR2EP22531 72 aa7.9□□□□□ -1.14
UBE3C-209ENST00000611269 SPRR2BP35325 72 aa7.9□□□□□ -1.14
UBE3C-209ENST00000611269 SPRR2AP35326 72 aa7.9□□□□□ -1.14
UBE3C-209ENST00000611269 LCE3CQ5T5A8 94 aa7.89□□□□□ -1.15
UBE3C-209ENST00000611269 MT1LQ93083 61 aa7.87□□□□□ -1.15
UBE3C-209ENST00000611269 KRTAP19-4Q3LI73 84 aa7.86□□□□□ -1.15
UBE3C-209ENST00000611269 H3BS24 57 aa7.85□□□□□ -1.15
UBE3C-209ENST00000611269 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
UBE3C-209ENST00000611269 NEBP20929 6669 aa7.8□□□□□ -1.16
UBE3C-209ENST00000611269 LCE5AQ5TCM9 118 aa7.76□□□□□ -1.17
UBE3C-209ENST00000611269 MT1GP13640 62 aa7.74□□□□□ -1.17
UBE3C-209ENST00000611269 MT1MQ8N339 61 aa7.64□□□□□ -1.19
UBE3C-209ENST00000611269 SPRR2DP22532 72 aa7.62□□□□□ -1.19
UBE3C-209ENST00000611269 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
UBE3C-209ENST00000611269 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
UBE3C-209ENST00000611269 KRTAP4-3Q9BYR4 195 aa7.49□□□□□ -1.21
UBE3C-209ENST00000611269 DSTQ03001 7570 aaKnown RBP7.42□□□□□ -1.22
UBE3C-209ENST00000611269 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
UBE3C-209ENST00000611269 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
UBE3C-209ENST00000611269 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
UBE3C-209ENST00000611269 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
UBE3C-209ENST00000611269 KRTAP20-1Q3LI63 56 aa7.29□□□□□ -1.24
UBE3C-209ENST00000611269 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.27
UBE3C-209ENST00000611269 KRTAP2-2Q9BYT5 123 aa7.12□□□□□ -1.27
UBE3C-209ENST00000611269 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
UBE3C-209ENST00000611269 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
UBE3C-209ENST00000611269 INE1O15225 51 aa6.83□□□□□ -1.32
UBE3C-209ENST00000611269 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
UBE3C-209ENST00000611269 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
UBE3C-209ENST00000611269 MT1AP04731 61 aa6.68□□□□□ -1.34
UBE3C-209ENST00000611269 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
UBE3C-209ENST00000611269 KRTAP6-1Q3LI64 71 aa6.64□□□□□ -1.35
UBE3C-209ENST00000611269 MT4P47944 62 aa6.64□□□□□ -1.35
UBE3C-209ENST00000611269 SYNE1Q8NF91 8797 aaKnown RBP6.59□□□□□ -1.35
UBE3C-209ENST00000611269 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
UBE3C-209ENST00000611269 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
UBE3C-209ENST00000611269 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
UBE3C-209ENST00000611269 HMCN1Q96RW7 5635 aa6.48□□□□□ -1.37
UBE3C-209ENST00000611269 KRTAP9-4Q9BYQ2 154 aa6.39□□□□□ -1.39
UBE3C-209ENST00000611269 KRTAP20-2Q3LI61 65 aa6.37□□□□□ -1.39
UBE3C-209ENST00000611269 KRTAP6-2Q3LI66 62 aa6.19□□□□□ -1.42
UBE3C-209ENST00000611269 KRTAP5-3Q6L8H2 238 aa6.15□□□□□ -1.42
UBE3C-209ENST00000611269 KRTAP5-2Q701N4 177 aa6.09□□□□□ -1.43
UBE3C-209ENST00000611269 MT3P25713 68 aa6.07□□□□□ -1.44
UBE3C-209ENST00000611269 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
UBE3C-209ENST00000611269 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.46
UBE3C-209ENST00000611269 LCE3EQ5T5B0 92 aa5.86□□□□□ -1.47
UBE3C-209ENST00000611269 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
UBE3C-209ENST00000611269 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
UBE3C-209ENST00000611269 GPR98Q8WXG9 6306 aa5.62□□□□□ -1.51
UBE3C-209ENST00000611269 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
UBE3C-209ENST00000611269 KRTAP5-8O75690 187 aa5.42□□□□□ -1.54
UBE3C-209ENST00000611269 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
UBE3C-209ENST00000611269 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
UBE3C-209ENST00000611269 KRTAP5-7Q6L8G8 165 aa5.32□□□□□ -1.56
UBE3C-209ENST00000611269 PRM1P04553 51 aa5.27□□□□□ -1.57
UBE3C-209ENST00000611269 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
UBE3C-209ENST00000611269 LCE1BQ5T7P3 118 aa5.05□□□□□ -1.6
UBE3C-209ENST00000611269 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
UBE3C-209ENST00000611269 LCE1CQ5T751 118 aa5□□□□□ -1.61
UBE3C-209ENST00000611269 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
UBE3C-209ENST00000611269 MUC5BQ9HC84 5762 aaPredicted RBP4.75□□□□□ -1.65
UBE3C-209ENST00000611269 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
UBE3C-209ENST00000611269 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
UBE3C-209ENST00000611269 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
UBE3C-209ENST00000611269 KRTAP21-2Q3LI59 83 aa4.36□□□□□ -1.71
UBE3C-209ENST00000611269 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
UBE3C-209ENST00000611269 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
UBE3C-209ENST00000611269 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
UBE3C-209ENST00000611269 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
UBE3C-209ENST00000611269 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
UBE3C-209ENST00000611269 KRTAP21-1Q3LI58 79 aa3.31□□□□□ -1.88
UBE3C-209ENST00000611269 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 103.2 ms