RNA–Protein interactions for RNA: ENST00000611216.4

KDM2B-219, Transcript of lysine demethylase 2B, humanhuman

TSL 5 BASIC

Gene KDM2B, Length 3,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-219ENST00000611216 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
KDM2B-219ENST00000611216 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
KDM2B-219ENST00000611216 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
KDM2B-219ENST00000611216 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
KDM2B-219ENST00000611216 MT1LQ93083 61 aa4.45□□□□□ -1.7
KDM2B-219ENST00000611216 MT1EP04732 61 aa4.43□□□□□ -1.7
KDM2B-219ENST00000611216 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
KDM2B-219ENST00000611216 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
KDM2B-219ENST00000611216 MT1GP13640 62 aa4.35□□□□□ -1.71
KDM2B-219ENST00000611216 MACF1Q9UPN3 7388 aaKnown RBP4.33□□□□□ -1.72
KDM2B-219ENST00000611216 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
KDM2B-219ENST00000611216 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
KDM2B-219ENST00000611216 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
KDM2B-219ENST00000611216 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
KDM2B-219ENST00000611216 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
KDM2B-219ENST00000611216 SPRR2FQ96RM1 72 aa4.22□□□□□ -1.73
KDM2B-219ENST00000611216 MDN1Q9NU22 5596 aa4.22□□□□□ -1.73
KDM2B-219ENST00000611216 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.73
KDM2B-219ENST00000611216 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
KDM2B-219ENST00000611216 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
KDM2B-219ENST00000611216 MT1MQ8N339 61 aa4.15□□□□□ -1.74
KDM2B-219ENST00000611216 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
KDM2B-219ENST00000611216 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
KDM2B-219ENST00000611216 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
KDM2B-219ENST00000611216 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
KDM2B-219ENST00000611216 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.76
KDM2B-219ENST00000611216 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
KDM2B-219ENST00000611216 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
KDM2B-219ENST00000611216 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
KDM2B-219ENST00000611216 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
KDM2B-219ENST00000611216 SPRR2EP22531 72 aa3.77□□□□□ -1.81
KDM2B-219ENST00000611216 SPRR2BP35325 72 aa3.77□□□□□ -1.81
KDM2B-219ENST00000611216 SPRR2AP35326 72 aa3.77□□□□□ -1.81
KDM2B-219ENST00000611216 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
KDM2B-219ENST00000611216 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
KDM2B-219ENST00000611216 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
KDM2B-219ENST00000611216 MT1AP04731 61 aa3.66□□□□□ -1.82
KDM2B-219ENST00000611216 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
KDM2B-219ENST00000611216 PRM1P04553 51 aa3.59□□□□□ -1.83
KDM2B-219ENST00000611216 SPRR2DP22532 72 aa3.56□□□□□ -1.84
KDM2B-219ENST00000611216 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
KDM2B-219ENST00000611216 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
KDM2B-219ENST00000611216 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
KDM2B-219ENST00000611216 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
KDM2B-219ENST00000611216 MT4P47944 62 aa3.44□□□□□ -1.86
KDM2B-219ENST00000611216 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
KDM2B-219ENST00000611216 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
KDM2B-219ENST00000611216 MT3P25713 68 aa3.31□□□□□ -1.88
KDM2B-219ENST00000611216 NEBP20929 6669 aa3.29□□□□□ -1.88
KDM2B-219ENST00000611216 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
KDM2B-219ENST00000611216 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
KDM2B-219ENST00000611216 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
KDM2B-219ENST00000611216 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
KDM2B-219ENST00000611216 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
KDM2B-219ENST00000611216 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
KDM2B-219ENST00000611216 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
KDM2B-219ENST00000611216 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
KDM2B-219ENST00000611216 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
KDM2B-219ENST00000611216 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
KDM2B-219ENST00000611216 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
KDM2B-219ENST00000611216 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
KDM2B-219ENST00000611216 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
KDM2B-219ENST00000611216 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
KDM2B-219ENST00000611216 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
KDM2B-219ENST00000611216 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
KDM2B-219ENST00000611216 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
KDM2B-219ENST00000611216 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
KDM2B-219ENST00000611216 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
KDM2B-219ENST00000611216 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
KDM2B-219ENST00000611216 KRTAP5-11Q6L8G4 156 aa2.42□□□□□ -2.02
KDM2B-219ENST00000611216 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
KDM2B-219ENST00000611216 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
KDM2B-219ENST00000611216 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
KDM2B-219ENST00000611216 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
KDM2B-219ENST00000611216 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
KDM2B-219ENST00000611216 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
KDM2B-219ENST00000611216 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 8.5 ms