RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 DSTQ03001 7570 aaKnown RBP6.51□□□□□ -1.37
SNAPC3-207ENST00000610884 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
SNAPC3-207ENST00000610884 INE1O15225 51 aa6.44□□□□□ -1.38
SNAPC3-207ENST00000610884 MT1LQ93083 61 aa6.43□□□□□ -1.38
SNAPC3-207ENST00000610884 LCE3CQ5T5A8 94 aa6.39□□□□□ -1.39
SNAPC3-207ENST00000610884 KRTAP9-6A0A140TA67 174 aa6.35□□□□□ -1.39
SNAPC3-207ENST00000610884 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
SNAPC3-207ENST00000610884 KRTAP9-6A8MVA2 160 aa6.25□□□□□ -1.41
SNAPC3-207ENST00000610884 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.24□□□□□ -1.41
SNAPC3-207ENST00000610884 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
SNAPC3-207ENST00000610884 MT1MQ8N339 61 aa6.16□□□□□ -1.42
SNAPC3-207ENST00000610884 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
SNAPC3-207ENST00000610884 MT1GP13640 62 aa6.13□□□□□ -1.43
SNAPC3-207ENST00000610884 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
SNAPC3-207ENST00000610884 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
SNAPC3-207ENST00000610884 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
SNAPC3-207ENST00000610884 SPRR2EP22531 72 aa6.06□□□□□ -1.44
SNAPC3-207ENST00000610884 SPRR2BP35325 72 aa6.06□□□□□ -1.44
SNAPC3-207ENST00000610884 SPRR2AP35326 72 aa6.06□□□□□ -1.44
SNAPC3-207ENST00000610884 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.46
SNAPC3-207ENST00000610884 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
SNAPC3-207ENST00000610884 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
SNAPC3-207ENST00000610884 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
SNAPC3-207ENST00000610884 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
SNAPC3-207ENST00000610884 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
SNAPC3-207ENST00000610884 SPRR2DP22532 72 aa5.81□□□□□ -1.48
SNAPC3-207ENST00000610884 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
SNAPC3-207ENST00000610884 NEBP20929 6669 aa5.76□□□□□ -1.49
SNAPC3-207ENST00000610884 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
SNAPC3-207ENST00000610884 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
SNAPC3-207ENST00000610884 KRTAP5-5Q701N2 237 aaPredicted RBP5.48□□□□□ -1.53
SNAPC3-207ENST00000610884 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
SNAPC3-207ENST00000610884 MT1AP04731 61 aa5.36□□□□□ -1.55
SNAPC3-207ENST00000610884 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
SNAPC3-207ENST00000610884 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
SNAPC3-207ENST00000610884 MT4P47944 62 aa5.22□□□□□ -1.57
SNAPC3-207ENST00000610884 KRTAP4-6Q9BYQ5 205 aa5.18□□□□□ -1.58
SNAPC3-207ENST00000610884 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
SNAPC3-207ENST00000610884 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
SNAPC3-207ENST00000610884 KRTAP5-4Q6L8H1 288 aa5.13□□□□□ -1.59
SNAPC3-207ENST00000610884 KRTAP2-2Q9BYT5 123 aa5.12□□□□□ -1.59
SNAPC3-207ENST00000610884 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
SNAPC3-207ENST00000610884 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
SNAPC3-207ENST00000610884 LCE1DQ5T752 114 aa5□□□□□ -1.61
SNAPC3-207ENST00000610884 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SNAPC3-207ENST00000610884 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
SNAPC3-207ENST00000610884 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
SNAPC3-207ENST00000610884 MT3P25713 68 aa4.85□□□□□ -1.63
SNAPC3-207ENST00000610884 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
SNAPC3-207ENST00000610884 PRM1P04553 51 aa4.75□□□□□ -1.65
SNAPC3-207ENST00000610884 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
SNAPC3-207ENST00000610884 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
SNAPC3-207ENST00000610884 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
SNAPC3-207ENST00000610884 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SNAPC3-207ENST00000610884 LCE1BQ5T7P3 118 aa4.19□□□□□ -1.74
SNAPC3-207ENST00000610884 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
SNAPC3-207ENST00000610884 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SNAPC3-207ENST00000610884 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
SNAPC3-207ENST00000610884 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SNAPC3-207ENST00000610884 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
SNAPC3-207ENST00000610884 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
SNAPC3-207ENST00000610884 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
SNAPC3-207ENST00000610884 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SNAPC3-207ENST00000610884 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
SNAPC3-207ENST00000610884 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
SNAPC3-207ENST00000610884 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
SNAPC3-207ENST00000610884 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SNAPC3-207ENST00000610884 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SNAPC3-207ENST00000610884 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.53□□□□□ -1.84
SNAPC3-207ENST00000610884 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
SNAPC3-207ENST00000610884 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
SNAPC3-207ENST00000610884 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SNAPC3-207ENST00000610884 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
SNAPC3-207ENST00000610884 LCE1FQ5T754 118 aa3□□□□□ -1.93
SNAPC3-207ENST00000610884 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
SNAPC3-207ENST00000610884 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SNAPC3-207ENST00000610884 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 9.9 ms