RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 MMP24-AS1A0A0U1RRL7 71 aa0.99□□□□□ -2.25
AC004542.1-201ENST00000602955 MT1HL1P0DM35 61 aa0.98□□□□□ -2.25
AC004542.1-201ENST00000602955 Q5VSD8 79 aa0.98□□□□□ -2.25
AC004542.1-201ENST00000602955 LRP2P98164 4655 aa0.98□□□□□ -2.25
AC004542.1-201ENST00000602955 MUC17Q685J3 4493 aa0.97□□□□□ -2.25
AC004542.1-201ENST00000602955 UBR4Q5T4S7 5183 aa0.97□□□□□ -2.25
AC004542.1-201ENST00000602955 FLGP20930 4061 aaPredicted RBP0.96□□□□□ -2.26
AC004542.1-201ENST00000602955 C10orf95Q9H7T3 257 aa0.96□□□□□ -2.26
AC004542.1-201ENST00000602955 WFDC13Q8IUB5 93 aa0.95□□□□□ -2.26
AC004542.1-201ENST00000602955 DEFB105AQ8NG35 78 aa0.95□□□□□ -2.26
AC004542.1-201ENST00000602955 KRTAP4-1Q9BYQ7 146 aa0.93□□□□□ -2.26
AC004542.1-201ENST00000602955 FCGBPQ9Y6R7 5405 aaPredicted RBP0.92□□□□□ -2.26
AC004542.1-201ENST00000602955 RNF213Q63HN8 5207 aa0.92□□□□□ -2.26
AC004542.1-201ENST00000602955 MUC2Q02817 5179 aa0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 H0YAA0 97 aa0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 SMR3BP02814 79 aaPredicted RBP0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 H1FX-AS1Q4G0G2 97 aa0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
AC004542.1-201ENST00000602955 LPAP08519 4548 aa0.9□□□□□ -2.26
AC004542.1-201ENST00000602955 HMCN1Q96RW7 5635 aa0.89□□□□□ -2.27
AC004542.1-201ENST00000602955 M0QZ58 72 aa0.88□□□□□ -2.27
AC004542.1-201ENST00000602955 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
AC004542.1-201ENST00000602955 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
AC004542.1-201ENST00000602955 S4R3F8 94 aa0.83□□□□□ -2.28
AC004542.1-201ENST00000602955 MT1HP80294 61 aa0.82□□□□□ -2.28
AC004542.1-201ENST00000602955 SPRR2GQ9BYE4 73 aa0.82□□□□□ -2.28
AC004542.1-201ENST00000602955 KRTAP19-8Q3LI54 63 aa0.8□□□□□ -2.28
AC004542.1-201ENST00000602955 TNP1P09430 55 aa0.79□□□□□ -2.28
AC004542.1-201ENST00000602955 USH2AO75445 5202 aa0.79□□□□□ -2.28
AC004542.1-201ENST00000602955 MT2AP02795 61 aa0.78□□□□□ -2.28
AC004542.1-201ENST00000602955 MT1FP04733 61 aa0.77□□□□□ -2.29
AC004542.1-201ENST00000602955 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
AC004542.1-201ENST00000602955 MT1BP07438 61 aa0.75□□□□□ -2.29
AC004542.1-201ENST00000602955 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
AC004542.1-201ENST00000602955 MT1XP80297 61 aa0.73□□□□□ -2.29
AC004542.1-201ENST00000602955 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
AC004542.1-201ENST00000602955 MDN1Q9NU22 5596 aa0.71□□□□□ -2.3
AC004542.1-201ENST00000602955 M0R2T5 61 aa0.71□□□□□ -2.3
AC004542.1-201ENST00000602955 KRTAP2-3P0C7H8 128 aa0.7□□□□□ -2.3
AC004542.1-201ENST00000602955 KRTAP2-4Q9BYR9 128 aa0.7□□□□□ -2.3
AC004542.1-201ENST00000602955 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
AC004542.1-201ENST00000602955 KMT2DO14686 5537 aa0.7□□□□□ -2.3
AC004542.1-201ENST00000602955 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
AC004542.1-201ENST00000602955 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
AC004542.1-201ENST00000602955 MUC12Q9UKN1 5478 aa0.67□□□□□ -2.3
AC004542.1-201ENST00000602955 FSIP2Q5CZC0 6907 aa0.67□□□□□ -2.3
AC004542.1-201ENST00000602955 KRTAP19-7Q3SYF9 63 aa0.66□□□□□ -2.3
AC004542.1-201ENST00000602955 NEBP20929 6669 aa0.65□□□□□ -2.31
AC004542.1-201ENST00000602955 MT1EP04732 61 aa0.65□□□□□ -2.31
AC004542.1-201ENST00000602955 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
AC004542.1-201ENST00000602955 MT1LQ93083 61 aa0.63□□□□□ -2.31
AC004542.1-201ENST00000602955 MT1GP13640 62 aa0.62□□□□□ -2.31
AC004542.1-201ENST00000602955 KRTAP19-5Q3LI72 72 aa0.62□□□□□ -2.31
AC004542.1-201ENST00000602955 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
AC004542.1-201ENST00000602955 MT1MQ8N339 61 aa0.59□□□□□ -2.31
AC004542.1-201ENST00000602955 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
AC004542.1-201ENST00000602955 SPRR2FQ96RM1 72 aa0.57□□□□□ -2.32
AC004542.1-201ENST00000602955 MT1AP04731 61 aa0.55□□□□□ -2.32
AC004542.1-201ENST00000602955 SPRR2EP22531 72 aa0.54□□□□□ -2.32
AC004542.1-201ENST00000602955 SPRR2BP35325 72 aa0.54□□□□□ -2.32
AC004542.1-201ENST00000602955 SPRR2AP35326 72 aa0.54□□□□□ -2.32
AC004542.1-201ENST00000602955 GPR98Q8WXG9 6306 aa0.53□□□□□ -2.32
AC004542.1-201ENST00000602955 SPRR2DP22532 72 aa0.53□□□□□ -2.32
AC004542.1-201ENST00000602955 KRTAP20-1Q3LI63 56 aa0.52□□□□□ -2.33
AC004542.1-201ENST00000602955 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
AC004542.1-201ENST00000602955 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
AC004542.1-201ENST00000602955 AHNAK2Q8IVF2 5795 aa0.5□□□□□ -2.33
AC004542.1-201ENST00000602955 KRTAP6-1Q3LI64 71 aa0.5□□□□□ -2.33
AC004542.1-201ENST00000602955 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
AC004542.1-201ENST00000602955 PRM1P04553 51 aa0.49□□□□□ -2.33
AC004542.1-201ENST00000602955 KRTAP20-2Q3LI61 65 aa0.49□□□□□ -2.33
AC004542.1-201ENST00000602955 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
AC004542.1-201ENST00000602955 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
AC004542.1-201ENST00000602955 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
AC004542.1-201ENST00000602955 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
AC004542.1-201ENST00000602955 MT4P47944 62 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 90.4 ms