RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SPRR2EP22531 72 aa6.62□□□□□ -1.35
SSBP4-212ENST00000601919 SPRR2BP35325 72 aa6.62□□□□□ -1.35
SSBP4-212ENST00000601919 SPRR2AP35326 72 aa6.62□□□□□ -1.35
SSBP4-212ENST00000601919 KRTAP19-3Q7Z4W3 81 aa6.62□□□□□ -1.35
SSBP4-212ENST00000601919 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
SSBP4-212ENST00000601919 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
SSBP4-212ENST00000601919 MT1GP13640 62 aa6.56□□□□□ -1.36
SSBP4-212ENST00000601919 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
SSBP4-212ENST00000601919 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
SSBP4-212ENST00000601919 MT1MQ8N339 61 aa6.43□□□□□ -1.38
SSBP4-212ENST00000601919 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
SSBP4-212ENST00000601919 MDN1Q9NU22 5596 aa6.4□□□□□ -1.39
SSBP4-212ENST00000601919 SPRR2DP22532 72 aa6.39□□□□□ -1.39
SSBP4-212ENST00000601919 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
SSBP4-212ENST00000601919 NEBP20929 6669 aa6.29□□□□□ -1.4
SSBP4-212ENST00000601919 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
SSBP4-212ENST00000601919 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
SSBP4-212ENST00000601919 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
SSBP4-212ENST00000601919 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
SSBP4-212ENST00000601919 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
SSBP4-212ENST00000601919 KRTAP20-1Q3LI63 56 aa6.08□□□□□ -1.44
SSBP4-212ENST00000601919 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
SSBP4-212ENST00000601919 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
SSBP4-212ENST00000601919 KRTAP2-1Q9BYU5 128 aa5.98□□□□□ -1.45
SSBP4-212ENST00000601919 KRTAP9-6A8MVA2 160 aa5.97□□□□□ -1.45
SSBP4-212ENST00000601919 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SSBP4-212ENST00000601919 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
SSBP4-212ENST00000601919 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
SSBP4-212ENST00000601919 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
SSBP4-212ENST00000601919 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
SSBP4-212ENST00000601919 MT1AP04731 61 aa5.66□□□□□ -1.5
SSBP4-212ENST00000601919 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
SSBP4-212ENST00000601919 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
SSBP4-212ENST00000601919 MT4P47944 62 aa5.52□□□□□ -1.53
SSBP4-212ENST00000601919 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
SSBP4-212ENST00000601919 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
SSBP4-212ENST00000601919 NDUFAF8A1L188 74 aa5.45□□□□□ -1.54
SSBP4-212ENST00000601919 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
SSBP4-212ENST00000601919 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
SSBP4-212ENST00000601919 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
SSBP4-212ENST00000601919 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
SSBP4-212ENST00000601919 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
SSBP4-212ENST00000601919 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
SSBP4-212ENST00000601919 MT3P25713 68 aa5.17□□□□□ -1.58
SSBP4-212ENST00000601919 KRTAP5-3Q6L8H2 238 aa5.13□□□□□ -1.59
SSBP4-212ENST00000601919 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
SSBP4-212ENST00000601919 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
SSBP4-212ENST00000601919 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
SSBP4-212ENST00000601919 AHNAK2Q8IVF2 5795 aa4.75□□□□□ -1.65
SSBP4-212ENST00000601919 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SSBP4-212ENST00000601919 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
SSBP4-212ENST00000601919 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
SSBP4-212ENST00000601919 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
SSBP4-212ENST00000601919 INE1O15225 51 aa4.57□□□□□ -1.68
SSBP4-212ENST00000601919 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
SSBP4-212ENST00000601919 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
SSBP4-212ENST00000601919 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
SSBP4-212ENST00000601919 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
SSBP4-212ENST00000601919 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
SSBP4-212ENST00000601919 H3BS24 57 aa4.26□□□□□ -1.73
SSBP4-212ENST00000601919 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
SSBP4-212ENST00000601919 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
SSBP4-212ENST00000601919 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
SSBP4-212ENST00000601919 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
SSBP4-212ENST00000601919 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
SSBP4-212ENST00000601919 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
SSBP4-212ENST00000601919 PRM1P04553 51 aa3.88□□□□□ -1.79
SSBP4-212ENST00000601919 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
SSBP4-212ENST00000601919 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
SSBP4-212ENST00000601919 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
SSBP4-212ENST00000601919 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
SSBP4-212ENST00000601919 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SSBP4-212ENST00000601919 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SSBP4-212ENST00000601919 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
SSBP4-212ENST00000601919 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SSBP4-212ENST00000601919 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
SSBP4-212ENST00000601919 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
SSBP4-212ENST00000601919 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms