RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
SYDE1-204ENST00000600440 MT1EP04732 61 aa5.22□□□□□ -1.57
SYDE1-204ENST00000600440 MT1GP13640 62 aa5.22□□□□□ -1.57
SYDE1-204ENST00000600440 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
SYDE1-204ENST00000600440 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
SYDE1-204ENST00000600440 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
SYDE1-204ENST00000600440 LCE2AQ5TA79 106 aaPredicted RBP5.11□□□□□ -1.59
SYDE1-204ENST00000600440 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
SYDE1-204ENST00000600440 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
SYDE1-204ENST00000600440 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
SYDE1-204ENST00000600440 KRTAP19-4Q3LI73 84 aa4.95□□□□□ -1.62
SYDE1-204ENST00000600440 MT1MQ8N339 61 aa4.87□□□□□ -1.63
SYDE1-204ENST00000600440 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
SYDE1-204ENST00000600440 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
SYDE1-204ENST00000600440 PRM1P04553 51 aa4.81□□□□□ -1.64
SYDE1-204ENST00000600440 KRTAP9-2Q9BYQ4 174 aa4.81□□□□□ -1.64
SYDE1-204ENST00000600440 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
SYDE1-204ENST00000600440 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
SYDE1-204ENST00000600440 LCE3DQ9BYE3 92 aa4.72□□□□□ -1.65
SYDE1-204ENST00000600440 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
SYDE1-204ENST00000600440 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
SYDE1-204ENST00000600440 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
SYDE1-204ENST00000600440 KRTAP5-5Q701N2 237 aaPredicted RBP4.62□□□□□ -1.67
SYDE1-204ENST00000600440 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
SYDE1-204ENST00000600440 SPRR2FQ96RM1 72 aa4.58□□□□□ -1.68
SYDE1-204ENST00000600440 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
SYDE1-204ENST00000600440 MT1AP04731 61 aa4.53□□□□□ -1.68
SYDE1-204ENST00000600440 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
SYDE1-204ENST00000600440 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
SYDE1-204ENST00000600440 KRTAP9-6A0A140TA67 174 aa4.44□□□□□ -1.7
SYDE1-204ENST00000600440 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
SYDE1-204ENST00000600440 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SYDE1-204ENST00000600440 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SYDE1-204ENST00000600440 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
SYDE1-204ENST00000600440 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
SYDE1-204ENST00000600440 SPRR2EP22531 72 aa4.06□□□□□ -1.76
SYDE1-204ENST00000600440 SPRR2BP35325 72 aa4.06□□□□□ -1.76
SYDE1-204ENST00000600440 SPRR2AP35326 72 aa4.06□□□□□ -1.76
SYDE1-204ENST00000600440 MT3P25713 68 aa3.95□□□□□ -1.78
SYDE1-204ENST00000600440 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
SYDE1-204ENST00000600440 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
SYDE1-204ENST00000600440 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SYDE1-204ENST00000600440 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
SYDE1-204ENST00000600440 MT4P47944 62 aa3.59□□□□□ -1.84
SYDE1-204ENST00000600440 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SYDE1-204ENST00000600440 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
SYDE1-204ENST00000600440 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
SYDE1-204ENST00000600440 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
SYDE1-204ENST00000600440 NEBP20929 6669 aa3.43□□□□□ -1.86
SYDE1-204ENST00000600440 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
SYDE1-204ENST00000600440 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
SYDE1-204ENST00000600440 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
SYDE1-204ENST00000600440 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SYDE1-204ENST00000600440 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
SYDE1-204ENST00000600440 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
SYDE1-204ENST00000600440 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
SYDE1-204ENST00000600440 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
SYDE1-204ENST00000600440 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
SYDE1-204ENST00000600440 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SYDE1-204ENST00000600440 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
SYDE1-204ENST00000600440 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
SYDE1-204ENST00000600440 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
SYDE1-204ENST00000600440 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
SYDE1-204ENST00000600440 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
SYDE1-204ENST00000600440 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SYDE1-204ENST00000600440 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SYDE1-204ENST00000600440 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
SYDE1-204ENST00000600440 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
SYDE1-204ENST00000600440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SYDE1-204ENST00000600440 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SYDE1-204ENST00000600440 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
SYDE1-204ENST00000600440 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SYDE1-204ENST00000600440 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
SYDE1-204ENST00000600440 GPR98Q8WXG9 6306 aa2.34□□□□□ -2.04
SYDE1-204ENST00000600440 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
SYDE1-204ENST00000600440 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
SYDE1-204ENST00000600440 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 70.5 ms