RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
ARHGEF1-219ENST00000599846 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
ARHGEF1-219ENST00000599846 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
ARHGEF1-219ENST00000599846 MT1GP13640 62 aa5.26□□□□□ -1.57
ARHGEF1-219ENST00000599846 FCGBPQ9Y6R7 5405 aaPredicted RBP5.25□□□□□ -1.57
ARHGEF1-219ENST00000599846 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
ARHGEF1-219ENST00000599846 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
ARHGEF1-219ENST00000599846 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
ARHGEF1-219ENST00000599846 LCE2DQ5TA82 110 aaPredicted RBP5.08□□□□□ -1.6
ARHGEF1-219ENST00000599846 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
ARHGEF1-219ENST00000599846 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
ARHGEF1-219ENST00000599846 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
ARHGEF1-219ENST00000599846 MT1MQ8N339 61 aa5.06□□□□□ -1.6
ARHGEF1-219ENST00000599846 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
ARHGEF1-219ENST00000599846 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
ARHGEF1-219ENST00000599846 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.62
ARHGEF1-219ENST00000599846 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
ARHGEF1-219ENST00000599846 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.64
ARHGEF1-219ENST00000599846 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
ARHGEF1-219ENST00000599846 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
ARHGEF1-219ENST00000599846 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
ARHGEF1-219ENST00000599846 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
ARHGEF1-219ENST00000599846 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.68
ARHGEF1-219ENST00000599846 SPRR2EP22531 72 aa4.55□□□□□ -1.68
ARHGEF1-219ENST00000599846 SPRR2BP35325 72 aa4.55□□□□□ -1.68
ARHGEF1-219ENST00000599846 SPRR2AP35326 72 aa4.55□□□□□ -1.68
ARHGEF1-219ENST00000599846 MT1AP04731 61 aa4.51□□□□□ -1.69
ARHGEF1-219ENST00000599846 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
ARHGEF1-219ENST00000599846 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
ARHGEF1-219ENST00000599846 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
ARHGEF1-219ENST00000599846 PRM1P04553 51 aa4.39□□□□□ -1.71
ARHGEF1-219ENST00000599846 SPRR2DP22532 72 aa4.33□□□□□ -1.72
ARHGEF1-219ENST00000599846 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
ARHGEF1-219ENST00000599846 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
ARHGEF1-219ENST00000599846 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
ARHGEF1-219ENST00000599846 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
ARHGEF1-219ENST00000599846 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
ARHGEF1-219ENST00000599846 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
ARHGEF1-219ENST00000599846 MT3P25713 68 aa4.14□□□□□ -1.75
ARHGEF1-219ENST00000599846 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
ARHGEF1-219ENST00000599846 MT4P47944 62 aa3.96□□□□□ -1.78
ARHGEF1-219ENST00000599846 NEBP20929 6669 aa3.9□□□□□ -1.79
ARHGEF1-219ENST00000599846 KRTAP4-6Q9BYQ5 205 aa3.85□□□□□ -1.79
ARHGEF1-219ENST00000599846 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
ARHGEF1-219ENST00000599846 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
ARHGEF1-219ENST00000599846 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
ARHGEF1-219ENST00000599846 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
ARHGEF1-219ENST00000599846 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
ARHGEF1-219ENST00000599846 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.84
ARHGEF1-219ENST00000599846 LCE4AQ5TA78 99 aa3.54□□□□□ -1.84
ARHGEF1-219ENST00000599846 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
ARHGEF1-219ENST00000599846 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
ARHGEF1-219ENST00000599846 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
ARHGEF1-219ENST00000599846 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
ARHGEF1-219ENST00000599846 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
ARHGEF1-219ENST00000599846 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
ARHGEF1-219ENST00000599846 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
ARHGEF1-219ENST00000599846 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
ARHGEF1-219ENST00000599846 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
ARHGEF1-219ENST00000599846 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
ARHGEF1-219ENST00000599846 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
ARHGEF1-219ENST00000599846 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
ARHGEF1-219ENST00000599846 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
ARHGEF1-219ENST00000599846 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
ARHGEF1-219ENST00000599846 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
ARHGEF1-219ENST00000599846 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
ARHGEF1-219ENST00000599846 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
ARHGEF1-219ENST00000599846 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
ARHGEF1-219ENST00000599846 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
ARHGEF1-219ENST00000599846 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ARHGEF1-219ENST00000599846 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
ARHGEF1-219ENST00000599846 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
ARHGEF1-219ENST00000599846 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
ARHGEF1-219ENST00000599846 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
ARHGEF1-219ENST00000599846 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
ARHGEF1-219ENST00000599846 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
ARHGEF1-219ENST00000599846 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms