RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
PAF1-204ENST00000595564 MT1EP04732 61 aa5.23□□□□□ -1.57
PAF1-204ENST00000595564 INE1O15225 51 aa5.2□□□□□ -1.58
PAF1-204ENST00000595564 NEBP20929 6669 aa5.19□□□□□ -1.58
PAF1-204ENST00000595564 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
PAF1-204ENST00000595564 MT1LQ93083 61 aa5.16□□□□□ -1.58
PAF1-204ENST00000595564 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
PAF1-204ENST00000595564 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
PAF1-204ENST00000595564 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.6
PAF1-204ENST00000595564 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
PAF1-204ENST00000595564 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
PAF1-204ENST00000595564 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
PAF1-204ENST00000595564 MT1GP13640 62 aa4.95□□□□□ -1.62
PAF1-204ENST00000595564 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
PAF1-204ENST00000595564 MT1MQ8N339 61 aa4.92□□□□□ -1.62
PAF1-204ENST00000595564 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
PAF1-204ENST00000595564 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
PAF1-204ENST00000595564 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
PAF1-204ENST00000595564 SPRR2EP22531 72 aa4.84□□□□□ -1.63
PAF1-204ENST00000595564 SPRR2BP35325 72 aa4.84□□□□□ -1.63
PAF1-204ENST00000595564 SPRR2AP35326 72 aa4.84□□□□□ -1.63
PAF1-204ENST00000595564 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
PAF1-204ENST00000595564 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
PAF1-204ENST00000595564 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
PAF1-204ENST00000595564 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
PAF1-204ENST00000595564 SPRR2DP22532 72 aa4.67□□□□□ -1.66
PAF1-204ENST00000595564 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
PAF1-204ENST00000595564 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
PAF1-204ENST00000595564 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
PAF1-204ENST00000595564 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
PAF1-204ENST00000595564 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
PAF1-204ENST00000595564 MT1AP04731 61 aa4.37□□□□□ -1.71
PAF1-204ENST00000595564 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
PAF1-204ENST00000595564 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
PAF1-204ENST00000595564 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
PAF1-204ENST00000595564 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
PAF1-204ENST00000595564 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
PAF1-204ENST00000595564 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
PAF1-204ENST00000595564 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
PAF1-204ENST00000595564 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
PAF1-204ENST00000595564 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
PAF1-204ENST00000595564 MT4P47944 62 aa4.1□□□□□ -1.75
PAF1-204ENST00000595564 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
PAF1-204ENST00000595564 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
PAF1-204ENST00000595564 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
PAF1-204ENST00000595564 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
PAF1-204ENST00000595564 MT3P25713 68 aa3.95□□□□□ -1.78
PAF1-204ENST00000595564 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
PAF1-204ENST00000595564 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
PAF1-204ENST00000595564 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
PAF1-204ENST00000595564 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.8
PAF1-204ENST00000595564 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
PAF1-204ENST00000595564 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
PAF1-204ENST00000595564 KRTAP5-7Q6L8G8 165 aa3.67□□□□□ -1.82
PAF1-204ENST00000595564 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
PAF1-204ENST00000595564 PRM1P04553 51 aa3.53□□□□□ -1.84
PAF1-204ENST00000595564 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
PAF1-204ENST00000595564 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
PAF1-204ENST00000595564 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
PAF1-204ENST00000595564 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
PAF1-204ENST00000595564 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
PAF1-204ENST00000595564 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
PAF1-204ENST00000595564 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
PAF1-204ENST00000595564 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
PAF1-204ENST00000595564 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
PAF1-204ENST00000595564 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
PAF1-204ENST00000595564 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
PAF1-204ENST00000595564 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
PAF1-204ENST00000595564 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
PAF1-204ENST00000595564 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.96
PAF1-204ENST00000595564 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
PAF1-204ENST00000595564 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PAF1-204ENST00000595564 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
PAF1-204ENST00000595564 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
PAF1-204ENST00000595564 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
PAF1-204ENST00000595564 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
PAF1-204ENST00000595564 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 67 ms