RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 MRPL34Q9BQ48 92 aaKnown RBP1.58□□□□□ -2.16
LINC01539-206ENST00000593282 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
LINC01539-206ENST00000593282 SPINK6Q6UWN8 80 aa1.56□□□□□ -2.16
LINC01539-206ENST00000593282 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
LINC01539-206ENST00000593282 SPINK7P58062 85 aa1.53□□□□□ -2.16
LINC01539-206ENST00000593282 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
LINC01539-206ENST00000593282 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
LINC01539-206ENST00000593282 A0A1B0GU69 56 aa1.51□□□□□ -2.17
LINC01539-206ENST00000593282 SPINK1P00995 79 aa1.51□□□□□ -2.17
LINC01539-206ENST00000593282 RPS29P62273 56 aaKnown RBP1.51□□□□□ -2.17
LINC01539-206ENST00000593282 MUC17Q685J3 4493 aa1.49□□□□□ -2.17
LINC01539-206ENST00000593282 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
LINC01539-206ENST00000593282 FLGP20930 4061 aaPredicted RBP1.47□□□□□ -2.17
LINC01539-206ENST00000593282 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
LINC01539-206ENST00000593282 MT1HP80294 61 aa1.44□□□□□ -2.18
LINC01539-206ENST00000593282 C9orf92A6NGG3 77 aa1.43□□□□□ -2.18
LINC01539-206ENST00000593282 C10orf95Q9H7T3 257 aa1.43□□□□□ -2.18
LINC01539-206ENST00000593282 A0A0D9SG42 100 aa1.41□□□□□ -2.18
LINC01539-206ENST00000593282 SSPOA2VEC9 5147 aa1.4□□□□□ -2.18
LINC01539-206ENST00000593282 COX6B2Q6YFQ2 88 aa1.4□□□□□ -2.19
LINC01539-206ENST00000593282 H1FX-AS1Q4G0G2 97 aa1.39□□□□□ -2.19
LINC01539-206ENST00000593282 H0YAA0 97 aa1.38□□□□□ -2.19
LINC01539-206ENST00000593282 S4R3F8 94 aa1.38□□□□□ -2.19
LINC01539-206ENST00000593282 HMCN1Q96RW7 5635 aa1.37□□□□□ -2.19
LINC01539-206ENST00000593282 USH2AO75445 5202 aa1.37□□□□□ -2.19
LINC01539-206ENST00000593282 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
LINC01539-206ENST00000593282 MT1FP04733 61 aa1.34□□□□□ -2.19
LINC01539-206ENST00000593282 MT2AP02795 61 aa1.33□□□□□ -2.2
LINC01539-206ENST00000593282 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
LINC01539-206ENST00000593282 M0QZ58 72 aa1.31□□□□□ -2.2
LINC01539-206ENST00000593282 M0R2T5 61 aa1.31□□□□□ -2.2
LINC01539-206ENST00000593282 CRIPTQ9P021 101 aa1.3□□□□□ -2.2
LINC01539-206ENST00000593282 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
LINC01539-206ENST00000593282 SYNE2Q8WXH0 6885 aaKnown RBP1.24□□□□□ -2.21
LINC01539-206ENST00000593282 NEBP20929 6669 aa1.21□□□□□ -2.22
LINC01539-206ENST00000593282 MT1BP07438 61 aa1.2□□□□□ -2.22
LINC01539-206ENST00000593282 KRTAP20-1Q3LI63 56 aa1.19□□□□□ -2.22
LINC01539-206ENST00000593282 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
LINC01539-206ENST00000593282 TNP1P09430 55 aa1.18□□□□□ -2.22
LINC01539-206ENST00000593282 KMT2DO14686 5537 aa1.18□□□□□ -2.22
LINC01539-206ENST00000593282 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
LINC01539-206ENST00000593282 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
LINC01539-206ENST00000593282 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
LINC01539-206ENST00000593282 SPRR2EP22531 72 aa1.11□□□□□ -2.23
LINC01539-206ENST00000593282 SPRR2BP35325 72 aa1.11□□□□□ -2.23
LINC01539-206ENST00000593282 SPRR2AP35326 72 aa1.11□□□□□ -2.23
LINC01539-206ENST00000593282 MT1XP80297 61 aa1.1□□□□□ -2.23
LINC01539-206ENST00000593282 SPRR2FQ96RM1 72 aa1.1□□□□□ -2.23
LINC01539-206ENST00000593282 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
LINC01539-206ENST00000593282 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
LINC01539-206ENST00000593282 GPR98Q8WXG9 6306 aa1.08□□□□□ -2.24
LINC01539-206ENST00000593282 SPRR2DP22532 72 aa1.06□□□□□ -2.24
LINC01539-206ENST00000593282 KRTAP8-1Q8IUC2 63 aa1.05□□□□□ -2.24
LINC01539-206ENST00000593282 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
LINC01539-206ENST00000593282 KRTAP19-3Q7Z4W3 81 aa1.04□□□□□ -2.24
LINC01539-206ENST00000593282 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
LINC01539-206ENST00000593282 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
LINC01539-206ENST00000593282 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
LINC01539-206ENST00000593282 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
LINC01539-206ENST00000593282 MT1EP04732 61 aa0.97□□□□□ -2.25
LINC01539-206ENST00000593282 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
LINC01539-206ENST00000593282 MT4P47944 62 aa0.96□□□□□ -2.26
LINC01539-206ENST00000593282 MT1MQ8N339 61 aa0.93□□□□□ -2.26
LINC01539-206ENST00000593282 MT1LQ93083 61 aa0.91□□□□□ -2.26
LINC01539-206ENST00000593282 MT1GP13640 62 aa0.88□□□□□ -2.27
LINC01539-206ENST00000593282 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
LINC01539-206ENST00000593282 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
LINC01539-206ENST00000593282 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
LINC01539-206ENST00000593282 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
LINC01539-206ENST00000593282 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
LINC01539-206ENST00000593282 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
LINC01539-206ENST00000593282 KRTAP6-1Q3LI64 71 aa0.79□□□□□ -2.28
LINC01539-206ENST00000593282 MT1AP04731 61 aa0.77□□□□□ -2.29
LINC01539-206ENST00000593282 KRTAP6-2Q3LI66 62 aa0.76□□□□□ -2.29
LINC01539-206ENST00000593282 PRM1P04553 51 aa0.7□□□□□ -2.3
LINC01539-206ENST00000593282 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
LINC01539-206ENST00000593282 PHGR1C9JFL3 82 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 81.6 ms