RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 LOC100996750A0A140TA64 210 aa4.81□□□□□ -1.64
CIRBP-242ENST00000593093 MUC12Q9UKN1 5478 aa4.81□□□□□ -1.64
CIRBP-242ENST00000593093 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
CIRBP-242ENST00000593093 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
CIRBP-242ENST00000593093 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
CIRBP-242ENST00000593093 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CIRBP-242ENST00000593093 MT1LQ93083 61 aa4.75□□□□□ -1.65
CIRBP-242ENST00000593093 MT1GP13640 62 aa4.74□□□□□ -1.65
CIRBP-242ENST00000593093 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
CIRBP-242ENST00000593093 MT1EP04732 61 aa4.69□□□□□ -1.66
CIRBP-242ENST00000593093 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
CIRBP-242ENST00000593093 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
CIRBP-242ENST00000593093 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
CIRBP-242ENST00000593093 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
CIRBP-242ENST00000593093 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
CIRBP-242ENST00000593093 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
CIRBP-242ENST00000593093 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
CIRBP-242ENST00000593093 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
CIRBP-242ENST00000593093 MT1MQ8N339 61 aa4.4□□□□□ -1.71
CIRBP-242ENST00000593093 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
CIRBP-242ENST00000593093 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
CIRBP-242ENST00000593093 PRM1P04553 51 aa4.26□□□□□ -1.73
CIRBP-242ENST00000593093 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
CIRBP-242ENST00000593093 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
CIRBP-242ENST00000593093 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CIRBP-242ENST00000593093 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
CIRBP-242ENST00000593093 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
CIRBP-242ENST00000593093 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
CIRBP-242ENST00000593093 SPRR2EP22531 72 aa4.12□□□□□ -1.75
CIRBP-242ENST00000593093 SPRR2BP35325 72 aa4.12□□□□□ -1.75
CIRBP-242ENST00000593093 SPRR2AP35326 72 aa4.12□□□□□ -1.75
CIRBP-242ENST00000593093 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
CIRBP-242ENST00000593093 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
CIRBP-242ENST00000593093 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
CIRBP-242ENST00000593093 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CIRBP-242ENST00000593093 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
CIRBP-242ENST00000593093 KRTAP5-5Q701N2 237 aaPredicted RBP3.94□□□□□ -1.78
CIRBP-242ENST00000593093 MT1AP04731 61 aa3.93□□□□□ -1.78
CIRBP-242ENST00000593093 SPRR2DP22532 72 aa3.92□□□□□ -1.78
CIRBP-242ENST00000593093 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.78
CIRBP-242ENST00000593093 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
CIRBP-242ENST00000593093 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
CIRBP-242ENST00000593093 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
CIRBP-242ENST00000593093 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
CIRBP-242ENST00000593093 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
CIRBP-242ENST00000593093 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
CIRBP-242ENST00000593093 MT4P47944 62 aa3.62□□□□□ -1.83
CIRBP-242ENST00000593093 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
CIRBP-242ENST00000593093 MT3P25713 68 aa3.61□□□□□ -1.83
CIRBP-242ENST00000593093 NEBP20929 6669 aa3.57□□□□□ -1.84
CIRBP-242ENST00000593093 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
CIRBP-242ENST00000593093 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
CIRBP-242ENST00000593093 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
CIRBP-242ENST00000593093 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
CIRBP-242ENST00000593093 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
CIRBP-242ENST00000593093 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
CIRBP-242ENST00000593093 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CIRBP-242ENST00000593093 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CIRBP-242ENST00000593093 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
CIRBP-242ENST00000593093 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
CIRBP-242ENST00000593093 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
CIRBP-242ENST00000593093 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CIRBP-242ENST00000593093 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
CIRBP-242ENST00000593093 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CIRBP-242ENST00000593093 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
CIRBP-242ENST00000593093 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
CIRBP-242ENST00000593093 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
CIRBP-242ENST00000593093 KRTAP5-8O75690 187 aa2.56□□□□□ -2
CIRBP-242ENST00000593093 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
CIRBP-242ENST00000593093 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
CIRBP-242ENST00000593093 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
CIRBP-242ENST00000593093 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CIRBP-242ENST00000593093 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
CIRBP-242ENST00000593093 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CIRBP-242ENST00000593093 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
CIRBP-242ENST00000593093 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
CIRBP-242ENST00000593093 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CIRBP-242ENST00000593093 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 151 ms