RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
CDK5RAP3-218ENST00000580391 MT1LQ93083 61 aa5.27□□□□□ -1.57
CDK5RAP3-218ENST00000580391 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
CDK5RAP3-218ENST00000580391 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
CDK5RAP3-218ENST00000580391 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
CDK5RAP3-218ENST00000580391 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
CDK5RAP3-218ENST00000580391 KRTAP6-3Q3LI67 103 aa5.16□□□□□ -1.58
CDK5RAP3-218ENST00000580391 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
CDK5RAP3-218ENST00000580391 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
CDK5RAP3-218ENST00000580391 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CDK5RAP3-218ENST00000580391 INE1O15225 51 aa5.07□□□□□ -1.6
CDK5RAP3-218ENST00000580391 MT1GP13640 62 aa5.06□□□□□ -1.6
CDK5RAP3-218ENST00000580391 MT1MQ8N339 61 aa5.05□□□□□ -1.6
CDK5RAP3-218ENST00000580391 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
CDK5RAP3-218ENST00000580391 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
CDK5RAP3-218ENST00000580391 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
CDK5RAP3-218ENST00000580391 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
CDK5RAP3-218ENST00000580391 NEBP20929 6669 aa4.99□□□□□ -1.61
CDK5RAP3-218ENST00000580391 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
CDK5RAP3-218ENST00000580391 SPRR2EP22531 72 aa4.93□□□□□ -1.62
CDK5RAP3-218ENST00000580391 SPRR2BP35325 72 aa4.93□□□□□ -1.62
CDK5RAP3-218ENST00000580391 SPRR2AP35326 72 aa4.93□□□□□ -1.62
CDK5RAP3-218ENST00000580391 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
CDK5RAP3-218ENST00000580391 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
CDK5RAP3-218ENST00000580391 SPRR2DP22532 72 aa4.74□□□□□ -1.65
CDK5RAP3-218ENST00000580391 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
CDK5RAP3-218ENST00000580391 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
CDK5RAP3-218ENST00000580391 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
CDK5RAP3-218ENST00000580391 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
CDK5RAP3-218ENST00000580391 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
CDK5RAP3-218ENST00000580391 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
CDK5RAP3-218ENST00000580391 MT1AP04731 61 aa4.47□□□□□ -1.69
CDK5RAP3-218ENST00000580391 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
CDK5RAP3-218ENST00000580391 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
CDK5RAP3-218ENST00000580391 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
CDK5RAP3-218ENST00000580391 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
CDK5RAP3-218ENST00000580391 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
CDK5RAP3-218ENST00000580391 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
CDK5RAP3-218ENST00000580391 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
CDK5RAP3-218ENST00000580391 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
CDK5RAP3-218ENST00000580391 MT4P47944 62 aa4.14□□□□□ -1.75
CDK5RAP3-218ENST00000580391 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
CDK5RAP3-218ENST00000580391 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
CDK5RAP3-218ENST00000580391 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
CDK5RAP3-218ENST00000580391 HMCN1Q96RW7 5635 aa4.05□□□□□ -1.76
CDK5RAP3-218ENST00000580391 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CDK5RAP3-218ENST00000580391 MT3P25713 68 aa4.02□□□□□ -1.77
CDK5RAP3-218ENST00000580391 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
CDK5RAP3-218ENST00000580391 KRTAP5-2Q701N4 177 aa3.91□□□□□ -1.78
CDK5RAP3-218ENST00000580391 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
CDK5RAP3-218ENST00000580391 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
CDK5RAP3-218ENST00000580391 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CDK5RAP3-218ENST00000580391 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
CDK5RAP3-218ENST00000580391 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
CDK5RAP3-218ENST00000580391 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
CDK5RAP3-218ENST00000580391 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CDK5RAP3-218ENST00000580391 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CDK5RAP3-218ENST00000580391 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
CDK5RAP3-218ENST00000580391 PRM1P04553 51 aa3.42□□□□□ -1.86
CDK5RAP3-218ENST00000580391 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
CDK5RAP3-218ENST00000580391 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CDK5RAP3-218ENST00000580391 KRTAP5-8O75690 187 aa3.34□□□□□ -1.88
CDK5RAP3-218ENST00000580391 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
CDK5RAP3-218ENST00000580391 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
CDK5RAP3-218ENST00000580391 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
CDK5RAP3-218ENST00000580391 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CDK5RAP3-218ENST00000580391 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
CDK5RAP3-218ENST00000580391 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
CDK5RAP3-218ENST00000580391 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
CDK5RAP3-218ENST00000580391 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CDK5RAP3-218ENST00000580391 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
CDK5RAP3-218ENST00000580391 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CDK5RAP3-218ENST00000580391 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
CDK5RAP3-218ENST00000580391 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CDK5RAP3-218ENST00000580391 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
CDK5RAP3-218ENST00000580391 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
CDK5RAP3-218ENST00000580391 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CDK5RAP3-218ENST00000580391 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 56.1 ms