RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
NUP85-213ENST00000579838 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
NUP85-213ENST00000579838 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
NUP85-213ENST00000579838 KRTAP15-1Q3LI76 137 aa1.93□□□□□ -2.1
NUP85-213ENST00000579838 MT1XP80297 61 aa1.92□□□□□ -2.1
NUP85-213ENST00000579838 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
NUP85-213ENST00000579838 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
NUP85-213ENST00000579838 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
NUP85-213ENST00000579838 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
NUP85-213ENST00000579838 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
NUP85-213ENST00000579838 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
NUP85-213ENST00000579838 TNP1P09430 55 aa1.88□□□□□ -2.11
NUP85-213ENST00000579838 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
NUP85-213ENST00000579838 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
NUP85-213ENST00000579838 NEBP20929 6669 aa1.84□□□□□ -2.11
NUP85-213ENST00000579838 PP632Q6XCG6 107 aa1.84□□□□□ -2.11
NUP85-213ENST00000579838 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
NUP85-213ENST00000579838 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.12
NUP85-213ENST00000579838 USH2AO75445 5202 aa1.81□□□□□ -2.12
NUP85-213ENST00000579838 KRTAP10-12P60413 245 aa1.8□□□□□ -2.12
NUP85-213ENST00000579838 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
NUP85-213ENST00000579838 SPRR5A0A1B0GTR4 108 aa1.77□□□□□ -2.13
NUP85-213ENST00000579838 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
NUP85-213ENST00000579838 KRTAP19-5Q3LI72 72 aa1.75□□□□□ -2.13
NUP85-213ENST00000579838 KRTAP12-3P60328 96 aa1.74□□□□□ -2.13
NUP85-213ENST00000579838 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
NUP85-213ENST00000579838 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
NUP85-213ENST00000579838 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
NUP85-213ENST00000579838 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
NUP85-213ENST00000579838 INE1O15225 51 aa1.7□□□□□ -2.14
NUP85-213ENST00000579838 KMT2DO14686 5537 aa1.68□□□□□ -2.14
NUP85-213ENST00000579838 KRTAP2-3P0C7H8 128 aa1.68□□□□□ -2.14
NUP85-213ENST00000579838 KRTAP2-4Q9BYR9 128 aa1.68□□□□□ -2.14
NUP85-213ENST00000579838 MT1EP04732 61 aa1.66□□□□□ -2.14
NUP85-213ENST00000579838 MUC12Q9UKN1 5478 aa1.64□□□□□ -2.15
NUP85-213ENST00000579838 KRTAP9-6A8MVA2 160 aa1.64□□□□□ -2.15
NUP85-213ENST00000579838 LCE3CQ5T5A8 94 aa1.64□□□□□ -2.15
NUP85-213ENST00000579838 MT1LQ93083 61 aa1.64□□□□□ -2.15
NUP85-213ENST00000579838 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.15
NUP85-213ENST00000579838 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.15
NUP85-213ENST00000579838 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
NUP85-213ENST00000579838 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
NUP85-213ENST00000579838 MT1MQ8N339 61 aa1.56□□□□□ -2.16
NUP85-213ENST00000579838 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
NUP85-213ENST00000579838 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
NUP85-213ENST00000579838 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
NUP85-213ENST00000579838 MT1GP13640 62 aa1.52□□□□□ -2.17
NUP85-213ENST00000579838 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
NUP85-213ENST00000579838 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
NUP85-213ENST00000579838 LCE1AQ5T7P2 110 aa1.48□□□□□ -2.17
NUP85-213ENST00000579838 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
NUP85-213ENST00000579838 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
NUP85-213ENST00000579838 SPRR2EP22531 72 aa1.44□□□□□ -2.18
NUP85-213ENST00000579838 SPRR2BP35325 72 aa1.44□□□□□ -2.18
NUP85-213ENST00000579838 SPRR2AP35326 72 aa1.44□□□□□ -2.18
NUP85-213ENST00000579838 KRTAP6-1Q3LI64 71 aa1.41□□□□□ -2.18
NUP85-213ENST00000579838 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.19
NUP85-213ENST00000579838 MT1AP04731 61 aa1.38□□□□□ -2.19
NUP85-213ENST00000579838 SPRR2DP22532 72 aa1.38□□□□□ -2.19
NUP85-213ENST00000579838 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
NUP85-213ENST00000579838 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
NUP85-213ENST00000579838 SYNE1Q8NF91 8797 aaKnown RBP1.31□□□□□ -2.2
NUP85-213ENST00000579838 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
NUP85-213ENST00000579838 MT3P25713 68 aa1.28□□□□□ -2.2
NUP85-213ENST00000579838 KRTAP12-4P60329 112 aa1.26□□□□□ -2.21
NUP85-213ENST00000579838 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
NUP85-213ENST00000579838 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
NUP85-213ENST00000579838 MT4P47944 62 aa1.22□□□□□ -2.21
NUP85-213ENST00000579838 LCE3EQ5T5B0 92 aa1.21□□□□□ -2.22
NUP85-213ENST00000579838 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
NUP85-213ENST00000579838 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
NUP85-213ENST00000579838 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
NUP85-213ENST00000579838 PRM1P04553 51 aa1.14□□□□□ -2.23
NUP85-213ENST00000579838 MUC19Q7Z5P9 8384 aa1.09□□□□□ -2.24
NUP85-213ENST00000579838 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
NUP85-213ENST00000579838 PHGR1C9JFL3 82 aa0.9□□□□□ -2.27
NUP85-213ENST00000579838 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
NUP85-213ENST00000579838 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 121.2 ms