RNA–Protein interactions for RNA: ENST00000576924.5

SRRM2-230, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 3,314 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-230ENST00000576924 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
SRRM2-230ENST00000576924 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
SRRM2-230ENST00000576924 MT1GP13640 62 aa5.75□□□□□ -1.49
SRRM2-230ENST00000576924 MT1LQ93083 61 aa5.72□□□□□ -1.49
SRRM2-230ENST00000576924 MT1EP04732 61 aa5.7□□□□□ -1.5
SRRM2-230ENST00000576924 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
SRRM2-230ENST00000576924 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
SRRM2-230ENST00000576924 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
SRRM2-230ENST00000576924 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SRRM2-230ENST00000576924 LCE2DQ5TA82 110 aaPredicted RBP5.42□□□□□ -1.54
SRRM2-230ENST00000576924 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
SRRM2-230ENST00000576924 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
SRRM2-230ENST00000576924 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
SRRM2-230ENST00000576924 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
SRRM2-230ENST00000576924 SPRR2EP22531 72 aa5.05□□□□□ -1.6
SRRM2-230ENST00000576924 SPRR2BP35325 72 aa5.05□□□□□ -1.6
SRRM2-230ENST00000576924 SPRR2AP35326 72 aa5.05□□□□□ -1.6
SRRM2-230ENST00000576924 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
SRRM2-230ENST00000576924 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
SRRM2-230ENST00000576924 KRTAP6-1Q3LI64 71 aa4.99□□□□□ -1.61
SRRM2-230ENST00000576924 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
SRRM2-230ENST00000576924 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
SRRM2-230ENST00000576924 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SRRM2-230ENST00000576924 SPRR2DP22532 72 aa4.79□□□□□ -1.64
SRRM2-230ENST00000576924 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SRRM2-230ENST00000576924 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
SRRM2-230ENST00000576924 PRM1P04553 51 aa4.72□□□□□ -1.65
SRRM2-230ENST00000576924 MT1AP04731 61 aa4.72□□□□□ -1.65
SRRM2-230ENST00000576924 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
SRRM2-230ENST00000576924 MT4P47944 62 aa4.52□□□□□ -1.69
SRRM2-230ENST00000576924 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
SRRM2-230ENST00000576924 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
SRRM2-230ENST00000576924 MT3P25713 68 aa4.4□□□□□ -1.71
SRRM2-230ENST00000576924 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
SRRM2-230ENST00000576924 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
SRRM2-230ENST00000576924 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
SRRM2-230ENST00000576924 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
SRRM2-230ENST00000576924 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
SRRM2-230ENST00000576924 NEBP20929 6669 aa4.18□□□□□ -1.74
SRRM2-230ENST00000576924 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
SRRM2-230ENST00000576924 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.76
SRRM2-230ENST00000576924 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
SRRM2-230ENST00000576924 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
SRRM2-230ENST00000576924 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
SRRM2-230ENST00000576924 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
SRRM2-230ENST00000576924 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SRRM2-230ENST00000576924 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SRRM2-230ENST00000576924 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
SRRM2-230ENST00000576924 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SRRM2-230ENST00000576924 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SRRM2-230ENST00000576924 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SRRM2-230ENST00000576924 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
SRRM2-230ENST00000576924 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SRRM2-230ENST00000576924 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
SRRM2-230ENST00000576924 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SRRM2-230ENST00000576924 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
SRRM2-230ENST00000576924 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
SRRM2-230ENST00000576924 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
SRRM2-230ENST00000576924 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
SRRM2-230ENST00000576924 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
SRRM2-230ENST00000576924 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
SRRM2-230ENST00000576924 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
SRRM2-230ENST00000576924 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
SRRM2-230ENST00000576924 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
SRRM2-230ENST00000576924 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
SRRM2-230ENST00000576924 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
SRRM2-230ENST00000576924 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SRRM2-230ENST00000576924 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
SRRM2-230ENST00000576924 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
SRRM2-230ENST00000576924 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
SRRM2-230ENST00000576924 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
SRRM2-230ENST00000576924 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
SRRM2-230ENST00000576924 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 83.4 ms