RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 LOC100996750A0A140TA64 210 aa6.98□□□□□ -1.29
SCRT1-201ENST00000569446 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
SCRT1-201ENST00000569446 MT1LQ93083 61 aa6.91□□□□□ -1.3
SCRT1-201ENST00000569446 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
SCRT1-201ENST00000569446 MT1EP04732 61 aa6.88□□□□□ -1.31
SCRT1-201ENST00000569446 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.31
SCRT1-201ENST00000569446 LCE3BQ5TA77 95 aa6.69□□□□□ -1.34
SCRT1-201ENST00000569446 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
SCRT1-201ENST00000569446 KRTAP19-3Q7Z4W3 81 aa6.53□□□□□ -1.36
SCRT1-201ENST00000569446 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
SCRT1-201ENST00000569446 MT1MQ8N339 61 aa6.5□□□□□ -1.37
SCRT1-201ENST00000569446 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
SCRT1-201ENST00000569446 KRTAP2-3P0C7H8 128 aa6.47□□□□□ -1.37
SCRT1-201ENST00000569446 KRTAP4-9Q9BYQ8 210 aa6.47□□□□□ -1.37
SCRT1-201ENST00000569446 KRTAP2-4Q9BYR9 128 aa6.47□□□□□ -1.37
SCRT1-201ENST00000569446 KRTAP2-1Q9BYU5 128 aa6.47□□□□□ -1.37
SCRT1-201ENST00000569446 LCE2DQ5TA82 110 aaPredicted RBP6.44□□□□□ -1.38
SCRT1-201ENST00000569446 MDN1Q9NU22 5596 aa6.28□□□□□ -1.4
SCRT1-201ENST00000569446 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
SCRT1-201ENST00000569446 SPRR2EP22531 72 aa6.18□□□□□ -1.42
SCRT1-201ENST00000569446 SPRR2BP35325 72 aa6.18□□□□□ -1.42
SCRT1-201ENST00000569446 SPRR2AP35326 72 aa6.18□□□□□ -1.42
SCRT1-201ENST00000569446 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
SCRT1-201ENST00000569446 LCE3DQ9BYE3 92 aa6.05□□□□□ -1.44
SCRT1-201ENST00000569446 LCE5AQ5TCM9 118 aa6.03□□□□□ -1.44
SCRT1-201ENST00000569446 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
SCRT1-201ENST00000569446 LCE3EQ5T5B0 92 aa5.9□□□□□ -1.46
SCRT1-201ENST00000569446 SPRR2DP22532 72 aa5.87□□□□□ -1.47
SCRT1-201ENST00000569446 PRM1P04553 51 aa5.81□□□□□ -1.48
SCRT1-201ENST00000569446 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
SCRT1-201ENST00000569446 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
SCRT1-201ENST00000569446 MT1AP04731 61 aa5.73□□□□□ -1.49
SCRT1-201ENST00000569446 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
SCRT1-201ENST00000569446 MT4P47944 62 aa5.54□□□□□ -1.52
SCRT1-201ENST00000569446 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
SCRT1-201ENST00000569446 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
SCRT1-201ENST00000569446 MT3P25713 68 aa5.42□□□□□ -1.54
SCRT1-201ENST00000569446 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
SCRT1-201ENST00000569446 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
SCRT1-201ENST00000569446 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
SCRT1-201ENST00000569446 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
SCRT1-201ENST00000569446 MUC19Q7Z5P9 8384 aa5.15□□□□□ -1.59
SCRT1-201ENST00000569446 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
SCRT1-201ENST00000569446 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
SCRT1-201ENST00000569446 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
SCRT1-201ENST00000569446 NEBP20929 6669 aa4.96□□□□□ -1.62
SCRT1-201ENST00000569446 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
SCRT1-201ENST00000569446 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
SCRT1-201ENST00000569446 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
SCRT1-201ENST00000569446 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.66
SCRT1-201ENST00000569446 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SCRT1-201ENST00000569446 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SCRT1-201ENST00000569446 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
SCRT1-201ENST00000569446 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
SCRT1-201ENST00000569446 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
SCRT1-201ENST00000569446 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
SCRT1-201ENST00000569446 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
SCRT1-201ENST00000569446 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
SCRT1-201ENST00000569446 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
SCRT1-201ENST00000569446 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
SCRT1-201ENST00000569446 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
SCRT1-201ENST00000569446 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
SCRT1-201ENST00000569446 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
SCRT1-201ENST00000569446 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
SCRT1-201ENST00000569446 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SCRT1-201ENST00000569446 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
SCRT1-201ENST00000569446 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SCRT1-201ENST00000569446 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
SCRT1-201ENST00000569446 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SCRT1-201ENST00000569446 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
SCRT1-201ENST00000569446 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
SCRT1-201ENST00000569446 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SCRT1-201ENST00000569446 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SCRT1-201ENST00000569446 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
SCRT1-201ENST00000569446 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
SCRT1-201ENST00000569446 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SCRT1-201ENST00000569446 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms