RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.72
TMEM170A-205ENST00000568559 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
TMEM170A-205ENST00000568559 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
TMEM170A-205ENST00000568559 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
TMEM170A-205ENST00000568559 SPRR2EP22531 72 aa4.27□□□□□ -1.73
TMEM170A-205ENST00000568559 SPRR2BP35325 72 aa4.27□□□□□ -1.73
TMEM170A-205ENST00000568559 SPRR2AP35326 72 aa4.27□□□□□ -1.73
TMEM170A-205ENST00000568559 MT1EP04732 61 aa4.27□□□□□ -1.73
TMEM170A-205ENST00000568559 MT1GP13640 62 aa4.26□□□□□ -1.73
TMEM170A-205ENST00000568559 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
TMEM170A-205ENST00000568559 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
TMEM170A-205ENST00000568559 MT1LQ93083 61 aa4.21□□□□□ -1.74
TMEM170A-205ENST00000568559 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
TMEM170A-205ENST00000568559 MUC12Q9UKN1 5478 aa4.15□□□□□ -1.74
TMEM170A-205ENST00000568559 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
TMEM170A-205ENST00000568559 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
TMEM170A-205ENST00000568559 SPRR2DP22532 72 aa4.11□□□□□ -1.75
TMEM170A-205ENST00000568559 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
TMEM170A-205ENST00000568559 MT1MQ8N339 61 aa4.06□□□□□ -1.76
TMEM170A-205ENST00000568559 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
TMEM170A-205ENST00000568559 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
TMEM170A-205ENST00000568559 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
TMEM170A-205ENST00000568559 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
TMEM170A-205ENST00000568559 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
TMEM170A-205ENST00000568559 MT4P47944 62 aa3.88□□□□□ -1.79
TMEM170A-205ENST00000568559 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
TMEM170A-205ENST00000568559 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
TMEM170A-205ENST00000568559 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
TMEM170A-205ENST00000568559 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
TMEM170A-205ENST00000568559 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
TMEM170A-205ENST00000568559 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
TMEM170A-205ENST00000568559 MT1AP04731 61 aa3.62□□□□□ -1.83
TMEM170A-205ENST00000568559 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
TMEM170A-205ENST00000568559 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
TMEM170A-205ENST00000568559 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
TMEM170A-205ENST00000568559 NEBP20929 6669 aa3.6□□□□□ -1.83
TMEM170A-205ENST00000568559 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
TMEM170A-205ENST00000568559 MUC19Q7Z5P9 8384 aa3.58□□□□□ -1.84
TMEM170A-205ENST00000568559 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
TMEM170A-205ENST00000568559 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
TMEM170A-205ENST00000568559 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
TMEM170A-205ENST00000568559 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
TMEM170A-205ENST00000568559 MT3P25713 68 aa3.48□□□□□ -1.85
TMEM170A-205ENST00000568559 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
TMEM170A-205ENST00000568559 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
TMEM170A-205ENST00000568559 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
TMEM170A-205ENST00000568559 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
TMEM170A-205ENST00000568559 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
TMEM170A-205ENST00000568559 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
TMEM170A-205ENST00000568559 PRM1P04553 51 aa3.29□□□□□ -1.88
TMEM170A-205ENST00000568559 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
TMEM170A-205ENST00000568559 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.89
TMEM170A-205ENST00000568559 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
TMEM170A-205ENST00000568559 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
TMEM170A-205ENST00000568559 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
TMEM170A-205ENST00000568559 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
TMEM170A-205ENST00000568559 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
TMEM170A-205ENST00000568559 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
TMEM170A-205ENST00000568559 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
TMEM170A-205ENST00000568559 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
TMEM170A-205ENST00000568559 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
TMEM170A-205ENST00000568559 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
TMEM170A-205ENST00000568559 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
TMEM170A-205ENST00000568559 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
TMEM170A-205ENST00000568559 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
TMEM170A-205ENST00000568559 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
TMEM170A-205ENST00000568559 KRTAP5-8O75690 187 aa2.53□□□□□ -2
TMEM170A-205ENST00000568559 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
TMEM170A-205ENST00000568559 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
TMEM170A-205ENST00000568559 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
TMEM170A-205ENST00000568559 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
TMEM170A-205ENST00000568559 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
TMEM170A-205ENST00000568559 KRTAP5-11Q6L8G4 156 aa2.17□□□□□ -2.06
TMEM170A-205ENST00000568559 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.06
TMEM170A-205ENST00000568559 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.06
TMEM170A-205ENST00000568559 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TMEM170A-205ENST00000568559 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TMEM170A-205ENST00000568559 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 68.7 ms