RNA–Protein interactions for RNA: ENST00000567351.5

TEN1-CDK3-201, Transcript of TEN1-CDK3 readthrough (NMD candidate), humanhuman

TSL 2

Gene TEN1-CDK3, Length 3,897 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEN1-CDK3-201ENST00000567351 SSPOA2VEC9 5147 aa5.34□□□□□ -1.55
TEN1-CDK3-201ENST00000567351 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
TEN1-CDK3-201ENST00000567351 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
TEN1-CDK3-201ENST00000567351 LOC100996750A0A140TA64 210 aa5.29□□□□□ -1.56
TEN1-CDK3-201ENST00000567351 MT1LQ93083 61 aa5.27□□□□□ -1.57
TEN1-CDK3-201ENST00000567351 MT1EP04732 61 aa5.26□□□□□ -1.57
TEN1-CDK3-201ENST00000567351 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
TEN1-CDK3-201ENST00000567351 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
TEN1-CDK3-201ENST00000567351 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
TEN1-CDK3-201ENST00000567351 MACF1Q9UPN3 7388 aaKnown RBP5.1□□□□□ -1.59
TEN1-CDK3-201ENST00000567351 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
TEN1-CDK3-201ENST00000567351 SPRR2EP22531 72 aa5.02□□□□□ -1.61
TEN1-CDK3-201ENST00000567351 SPRR2BP35325 72 aa5.02□□□□□ -1.61
TEN1-CDK3-201ENST00000567351 SPRR2AP35326 72 aa5.02□□□□□ -1.61
TEN1-CDK3-201ENST00000567351 MT1MQ8N339 61 aa5.01□□□□□ -1.61
TEN1-CDK3-201ENST00000567351 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
TEN1-CDK3-201ENST00000567351 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
TEN1-CDK3-201ENST00000567351 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.63
TEN1-CDK3-201ENST00000567351 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
TEN1-CDK3-201ENST00000567351 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
TEN1-CDK3-201ENST00000567351 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
TEN1-CDK3-201ENST00000567351 SPRR2DP22532 72 aa4.78□□□□□ -1.64
TEN1-CDK3-201ENST00000567351 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
TEN1-CDK3-201ENST00000567351 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
TEN1-CDK3-201ENST00000567351 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
TEN1-CDK3-201ENST00000567351 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
TEN1-CDK3-201ENST00000567351 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
TEN1-CDK3-201ENST00000567351 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
TEN1-CDK3-201ENST00000567351 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TEN1-CDK3-201ENST00000567351 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
TEN1-CDK3-201ENST00000567351 MT4P47944 62 aa4.48□□□□□ -1.69
TEN1-CDK3-201ENST00000567351 MT1AP04731 61 aa4.42□□□□□ -1.7
TEN1-CDK3-201ENST00000567351 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
TEN1-CDK3-201ENST00000567351 PRM1P04553 51 aa4.34□□□□□ -1.71
TEN1-CDK3-201ENST00000567351 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.34□□□□□ -1.72
TEN1-CDK3-201ENST00000567351 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
TEN1-CDK3-201ENST00000567351 MT3P25713 68 aa4.26□□□□□ -1.73
TEN1-CDK3-201ENST00000567351 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
TEN1-CDK3-201ENST00000567351 KRTAP6-3Q3LI67 103 aa4.15□□□□□ -1.74
TEN1-CDK3-201ENST00000567351 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
TEN1-CDK3-201ENST00000567351 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
TEN1-CDK3-201ENST00000567351 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TEN1-CDK3-201ENST00000567351 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
TEN1-CDK3-201ENST00000567351 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
TEN1-CDK3-201ENST00000567351 NEBP20929 6669 aa3.99□□□□□ -1.77
TEN1-CDK3-201ENST00000567351 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
TEN1-CDK3-201ENST00000567351 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
TEN1-CDK3-201ENST00000567351 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
TEN1-CDK3-201ENST00000567351 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TEN1-CDK3-201ENST00000567351 MUC5ACP98088 5654 aa3.71□□□□□ -1.82
TEN1-CDK3-201ENST00000567351 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
TEN1-CDK3-201ENST00000567351 KRTAP20-2Q3LI61 65 aa3.66□□□□□ -1.82
TEN1-CDK3-201ENST00000567351 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
TEN1-CDK3-201ENST00000567351 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TEN1-CDK3-201ENST00000567351 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
TEN1-CDK3-201ENST00000567351 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
TEN1-CDK3-201ENST00000567351 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
TEN1-CDK3-201ENST00000567351 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TEN1-CDK3-201ENST00000567351 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
TEN1-CDK3-201ENST00000567351 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
TEN1-CDK3-201ENST00000567351 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
TEN1-CDK3-201ENST00000567351 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
TEN1-CDK3-201ENST00000567351 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
TEN1-CDK3-201ENST00000567351 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
TEN1-CDK3-201ENST00000567351 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
TEN1-CDK3-201ENST00000567351 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
TEN1-CDK3-201ENST00000567351 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
TEN1-CDK3-201ENST00000567351 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.94
TEN1-CDK3-201ENST00000567351 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
TEN1-CDK3-201ENST00000567351 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
TEN1-CDK3-201ENST00000567351 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
TEN1-CDK3-201ENST00000567351 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
TEN1-CDK3-201ENST00000567351 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
TEN1-CDK3-201ENST00000567351 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
TEN1-CDK3-201ENST00000567351 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
TEN1-CDK3-201ENST00000567351 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
TEN1-CDK3-201ENST00000567351 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
TEN1-CDK3-201ENST00000567351 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 83.8 ms