RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 KRTAP5-9P26371 169 aa6.84□□□□□ -1.31
COMMD4-213ENST00000565834 A0A0A0MQY5 61 aa6.78□□□□□ -1.32
COMMD4-213ENST00000565834 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
COMMD4-213ENST00000565834 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
COMMD4-213ENST00000565834 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
COMMD4-213ENST00000565834 MT1LQ93083 61 aa6.69□□□□□ -1.34
COMMD4-213ENST00000565834 NEBP20929 6669 aa6.66□□□□□ -1.34
COMMD4-213ENST00000565834 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
COMMD4-213ENST00000565834 LCE1AQ5T7P2 110 aa6.58□□□□□ -1.36
COMMD4-213ENST00000565834 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
COMMD4-213ENST00000565834 SPRR2EP22531 72 aa6.58□□□□□ -1.36
COMMD4-213ENST00000565834 SPRR2BP35325 72 aa6.58□□□□□ -1.36
COMMD4-213ENST00000565834 SPRR2AP35326 72 aa6.58□□□□□ -1.36
COMMD4-213ENST00000565834 MT1GP13640 62 aa6.56□□□□□ -1.36
COMMD4-213ENST00000565834 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
COMMD4-213ENST00000565834 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
COMMD4-213ENST00000565834 LCE3CQ5T5A8 94 aa6.5□□□□□ -1.37
COMMD4-213ENST00000565834 MT1MQ8N339 61 aa6.47□□□□□ -1.37
COMMD4-213ENST00000565834 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
COMMD4-213ENST00000565834 SPRR2DP22532 72 aa6.34□□□□□ -1.39
COMMD4-213ENST00000565834 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
COMMD4-213ENST00000565834 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
COMMD4-213ENST00000565834 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
COMMD4-213ENST00000565834 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
COMMD4-213ENST00000565834 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
COMMD4-213ENST00000565834 KRTAP9-6A8MVA2 160 aa6.12□□□□□ -1.43
COMMD4-213ENST00000565834 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
COMMD4-213ENST00000565834 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
COMMD4-213ENST00000565834 KRTAP2-1Q9BYU5 128 aa6.06□□□□□ -1.44
COMMD4-213ENST00000565834 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
COMMD4-213ENST00000565834 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
COMMD4-213ENST00000565834 INE1O15225 51 aa5.75□□□□□ -1.49
COMMD4-213ENST00000565834 MT1AP04731 61 aa5.69□□□□□ -1.5
COMMD4-213ENST00000565834 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
COMMD4-213ENST00000565834 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
COMMD4-213ENST00000565834 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
COMMD4-213ENST00000565834 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.52
COMMD4-213ENST00000565834 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
COMMD4-213ENST00000565834 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
COMMD4-213ENST00000565834 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
COMMD4-213ENST00000565834 MT4P47944 62 aa5.5□□□□□ -1.53
COMMD4-213ENST00000565834 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
COMMD4-213ENST00000565834 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
COMMD4-213ENST00000565834 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
COMMD4-213ENST00000565834 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
COMMD4-213ENST00000565834 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
COMMD4-213ENST00000565834 MT3P25713 68 aa5.17□□□□□ -1.58
COMMD4-213ENST00000565834 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
COMMD4-213ENST00000565834 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.59
COMMD4-213ENST00000565834 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
COMMD4-213ENST00000565834 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
COMMD4-213ENST00000565834 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
COMMD4-213ENST00000565834 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
COMMD4-213ENST00000565834 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
COMMD4-213ENST00000565834 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
COMMD4-213ENST00000565834 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
COMMD4-213ENST00000565834 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
COMMD4-213ENST00000565834 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
COMMD4-213ENST00000565834 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
COMMD4-213ENST00000565834 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
COMMD4-213ENST00000565834 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
COMMD4-213ENST00000565834 LCE1BQ5T7P3 118 aa4.26□□□□□ -1.73
COMMD4-213ENST00000565834 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
COMMD4-213ENST00000565834 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
COMMD4-213ENST00000565834 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
COMMD4-213ENST00000565834 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
COMMD4-213ENST00000565834 PRM1P04553 51 aa4.14□□□□□ -1.75
COMMD4-213ENST00000565834 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
COMMD4-213ENST00000565834 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
COMMD4-213ENST00000565834 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
COMMD4-213ENST00000565834 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
COMMD4-213ENST00000565834 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
COMMD4-213ENST00000565834 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
COMMD4-213ENST00000565834 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
COMMD4-213ENST00000565834 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
COMMD4-213ENST00000565834 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
COMMD4-213ENST00000565834 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
COMMD4-213ENST00000565834 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 13.4 ms