RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 FCGBPQ9Y6R7 5405 aaPredicted RBP2.51□□□□□ -2.01
PTPN9-204ENST00000564970 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
PTPN9-204ENST00000564970 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PTPN9-204ENST00000564970 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
PTPN9-204ENST00000564970 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PTPN9-204ENST00000564970 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
PTPN9-204ENST00000564970 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
PTPN9-204ENST00000564970 MUC17Q685J3 4493 aa2.42□□□□□ -2.02
PTPN9-204ENST00000564970 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
PTPN9-204ENST00000564970 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
PTPN9-204ENST00000564970 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
PTPN9-204ENST00000564970 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
PTPN9-204ENST00000564970 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
PTPN9-204ENST00000564970 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
PTPN9-204ENST00000564970 M0R2T5 61 aa2.37□□□□□ -2.03
PTPN9-204ENST00000564970 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
PTPN9-204ENST00000564970 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
PTPN9-204ENST00000564970 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
PTPN9-204ENST00000564970 KMT2DO14686 5537 aa2.31□□□□□ -2.04
PTPN9-204ENST00000564970 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
PTPN9-204ENST00000564970 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
PTPN9-204ENST00000564970 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
PTPN9-204ENST00000564970 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
PTPN9-204ENST00000564970 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
PTPN9-204ENST00000564970 MT1HP80294 61 aa2.2□□□□□ -2.06
PTPN9-204ENST00000564970 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
PTPN9-204ENST00000564970 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
PTPN9-204ENST00000564970 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
PTPN9-204ENST00000564970 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
PTPN9-204ENST00000564970 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
PTPN9-204ENST00000564970 KRTAP19-6Q3LI70 58 aa2.11□□□□□ -2.07
PTPN9-204ENST00000564970 KRTAP4-3Q9BYR4 195 aa2.1□□□□□ -2.07
PTPN9-204ENST00000564970 MT1XP80297 61 aa2.07□□□□□ -2.08
PTPN9-204ENST00000564970 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
PTPN9-204ENST00000564970 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
PTPN9-204ENST00000564970 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PTPN9-204ENST00000564970 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
PTPN9-204ENST00000564970 MT1AP04731 61 aa2□□□□□ -2.09
PTPN9-204ENST00000564970 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
PTPN9-204ENST00000564970 MT3P25713 68 aa1.99□□□□□ -2.09
PTPN9-204ENST00000564970 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
PTPN9-204ENST00000564970 MT1EP04732 61 aa1.98□□□□□ -2.09
PTPN9-204ENST00000564970 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
PTPN9-204ENST00000564970 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
PTPN9-204ENST00000564970 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
PTPN9-204ENST00000564970 MT1BP07438 61 aa1.96□□□□□ -2.1
PTPN9-204ENST00000564970 MT1LQ93083 61 aa1.94□□□□□ -2.1
PTPN9-204ENST00000564970 MT2AP02795 61 aa1.92□□□□□ -2.1
PTPN9-204ENST00000564970 PRM1P04553 51 aa1.9□□□□□ -2.11
PTPN9-204ENST00000564970 MT1FP04733 61 aa1.9□□□□□ -2.11
PTPN9-204ENST00000564970 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
PTPN9-204ENST00000564970 SPRR2EP22531 72 aa1.88□□□□□ -2.11
PTPN9-204ENST00000564970 SPRR2BP35325 72 aa1.88□□□□□ -2.11
PTPN9-204ENST00000564970 SPRR2AP35326 72 aa1.88□□□□□ -2.11
PTPN9-204ENST00000564970 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
PTPN9-204ENST00000564970 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
PTPN9-204ENST00000564970 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
PTPN9-204ENST00000564970 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
PTPN9-204ENST00000564970 SPRR2DP22532 72 aa1.82□□□□□ -2.12
PTPN9-204ENST00000564970 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PTPN9-204ENST00000564970 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
PTPN9-204ENST00000564970 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
PTPN9-204ENST00000564970 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
PTPN9-204ENST00000564970 MT1GP13640 62 aa1.7□□□□□ -2.14
PTPN9-204ENST00000564970 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
PTPN9-204ENST00000564970 MT4P47944 62 aa1.64□□□□□ -2.15
PTPN9-204ENST00000564970 MT1MQ8N339 61 aa1.63□□□□□ -2.15
PTPN9-204ENST00000564970 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
PTPN9-204ENST00000564970 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
PTPN9-204ENST00000564970 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
PTPN9-204ENST00000564970 KRTAP20-2Q3LI61 65 aa1.45□□□□□ -2.18
PTPN9-204ENST00000564970 LCE1CQ5T751 118 aa1.38□□□□□ -2.19
PTPN9-204ENST00000564970 LCE1BQ5T7P3 118 aa1.38□□□□□ -2.19
PTPN9-204ENST00000564970 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
PTPN9-204ENST00000564970 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
PTPN9-204ENST00000564970 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
PTPN9-204ENST00000564970 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
PTPN9-204ENST00000564970 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 211.5 ms