RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
KARS-204ENST00000564578 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
KARS-204ENST00000564578 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
KARS-204ENST00000564578 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
KARS-204ENST00000564578 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
KARS-204ENST00000564578 INE1O15225 51 aa4.85□□□□□ -1.63
KARS-204ENST00000564578 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
KARS-204ENST00000564578 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
KARS-204ENST00000564578 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
KARS-204ENST00000564578 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
KARS-204ENST00000564578 NEBP20929 6669 aa4.76□□□□□ -1.65
KARS-204ENST00000564578 TNP1P09430 55 aa4.76□□□□□ -1.65
KARS-204ENST00000564578 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
KARS-204ENST00000564578 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
KARS-204ENST00000564578 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
KARS-204ENST00000564578 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
KARS-204ENST00000564578 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
KARS-204ENST00000564578 SPRR2EP22531 72 aa4.63□□□□□ -1.67
KARS-204ENST00000564578 SPRR2BP35325 72 aa4.63□□□□□ -1.67
KARS-204ENST00000564578 SPRR2AP35326 72 aa4.63□□□□□ -1.67
KARS-204ENST00000564578 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
KARS-204ENST00000564578 MT1EP04732 61 aa4.61□□□□□ -1.67
KARS-204ENST00000564578 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
KARS-204ENST00000564578 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
KARS-204ENST00000564578 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
KARS-204ENST00000564578 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
KARS-204ENST00000564578 SPRR2DP22532 72 aa4.46□□□□□ -1.69
KARS-204ENST00000564578 PP632Q6XCG6 107 aa4.46□□□□□ -1.7
KARS-204ENST00000564578 MT1LQ93083 61 aa4.46□□□□□ -1.7
KARS-204ENST00000564578 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
KARS-204ENST00000564578 MT1GP13640 62 aa4.42□□□□□ -1.7
KARS-204ENST00000564578 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
KARS-204ENST00000564578 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
KARS-204ENST00000564578 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
KARS-204ENST00000564578 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
KARS-204ENST00000564578 MT1MQ8N339 61 aa4.36□□□□□ -1.71
KARS-204ENST00000564578 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
KARS-204ENST00000564578 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
KARS-204ENST00000564578 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
KARS-204ENST00000564578 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
KARS-204ENST00000564578 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
KARS-204ENST00000564578 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
KARS-204ENST00000564578 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
KARS-204ENST00000564578 MT4P47944 62 aa3.9□□□□□ -1.78
KARS-204ENST00000564578 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
KARS-204ENST00000564578 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
KARS-204ENST00000564578 MT1AP04731 61 aa3.78□□□□□ -1.8
KARS-204ENST00000564578 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
KARS-204ENST00000564578 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
KARS-204ENST00000564578 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
KARS-204ENST00000564578 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
KARS-204ENST00000564578 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
KARS-204ENST00000564578 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
KARS-204ENST00000564578 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
KARS-204ENST00000564578 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
KARS-204ENST00000564578 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
KARS-204ENST00000564578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
KARS-204ENST00000564578 MT3P25713 68 aa3.43□□□□□ -1.86
KARS-204ENST00000564578 LCE1EQ5T753 118 aa3.34□□□□□ -1.87
KARS-204ENST00000564578 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
KARS-204ENST00000564578 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
KARS-204ENST00000564578 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
KARS-204ENST00000564578 KRTAP5-8O75690 187 aa3.23□□□□□ -1.89
KARS-204ENST00000564578 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
KARS-204ENST00000564578 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
KARS-204ENST00000564578 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
KARS-204ENST00000564578 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
KARS-204ENST00000564578 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
KARS-204ENST00000564578 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
KARS-204ENST00000564578 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
KARS-204ENST00000564578 PRM1P04553 51 aa2.87□□□□□ -1.95
KARS-204ENST00000564578 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
KARS-204ENST00000564578 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
KARS-204ENST00000564578 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
KARS-204ENST00000564578 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
KARS-204ENST00000564578 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
KARS-204ENST00000564578 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
KARS-204ENST00000564578 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 97.1 ms