RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
CNN2-204ENST00000562075 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
CNN2-204ENST00000562075 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
CNN2-204ENST00000562075 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
CNN2-204ENST00000562075 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
CNN2-204ENST00000562075 MT1GP13640 62 aa4.96□□□□□ -1.62
CNN2-204ENST00000562075 SPRR2EP22531 72 aa4.94□□□□□ -1.62
CNN2-204ENST00000562075 SPRR2BP35325 72 aa4.94□□□□□ -1.62
CNN2-204ENST00000562075 SPRR2AP35326 72 aa4.94□□□□□ -1.62
CNN2-204ENST00000562075 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
CNN2-204ENST00000562075 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
CNN2-204ENST00000562075 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
CNN2-204ENST00000562075 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
CNN2-204ENST00000562075 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CNN2-204ENST00000562075 NEBP20929 6669 aa4.84□□□□□ -1.63
CNN2-204ENST00000562075 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
CNN2-204ENST00000562075 SPRR2DP22532 72 aa4.76□□□□□ -1.65
CNN2-204ENST00000562075 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
CNN2-204ENST00000562075 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
CNN2-204ENST00000562075 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CNN2-204ENST00000562075 NDUFAF8A1L188 74 aa4.59□□□□□ -1.67
CNN2-204ENST00000562075 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
CNN2-204ENST00000562075 KRTAP2-3P0C7H8 128 aa4.54□□□□□ -1.68
CNN2-204ENST00000562075 KRTAP2-4Q9BYR9 128 aa4.54□□□□□ -1.68
CNN2-204ENST00000562075 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
CNN2-204ENST00000562075 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
CNN2-204ENST00000562075 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
CNN2-204ENST00000562075 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
CNN2-204ENST00000562075 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
CNN2-204ENST00000562075 MT1AP04731 61 aa4.34□□□□□ -1.71
CNN2-204ENST00000562075 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
CNN2-204ENST00000562075 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
CNN2-204ENST00000562075 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
CNN2-204ENST00000562075 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
CNN2-204ENST00000562075 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
CNN2-204ENST00000562075 MT4P47944 62 aa4.11□□□□□ -1.75
CNN2-204ENST00000562075 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
CNN2-204ENST00000562075 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
CNN2-204ENST00000562075 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
CNN2-204ENST00000562075 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
CNN2-204ENST00000562075 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
CNN2-204ENST00000562075 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
CNN2-204ENST00000562075 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CNN2-204ENST00000562075 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
CNN2-204ENST00000562075 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
CNN2-204ENST00000562075 MT3P25713 68 aa3.94□□□□□ -1.78
CNN2-204ENST00000562075 H3BS24 57 aa3.89□□□□□ -1.79
CNN2-204ENST00000562075 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
CNN2-204ENST00000562075 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
CNN2-204ENST00000562075 INE1O15225 51 aa3.78□□□□□ -1.8
CNN2-204ENST00000562075 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
CNN2-204ENST00000562075 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CNN2-204ENST00000562075 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
CNN2-204ENST00000562075 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
CNN2-204ENST00000562075 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
CNN2-204ENST00000562075 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CNN2-204ENST00000562075 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
CNN2-204ENST00000562075 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
CNN2-204ENST00000562075 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CNN2-204ENST00000562075 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.87
CNN2-204ENST00000562075 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
CNN2-204ENST00000562075 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
CNN2-204ENST00000562075 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
CNN2-204ENST00000562075 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
CNN2-204ENST00000562075 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
CNN2-204ENST00000562075 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
CNN2-204ENST00000562075 PRM1P04553 51 aa3.14□□□□□ -1.91
CNN2-204ENST00000562075 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
CNN2-204ENST00000562075 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CNN2-204ENST00000562075 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
CNN2-204ENST00000562075 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CNN2-204ENST00000562075 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
CNN2-204ENST00000562075 LCE1FQ5T754 118 aa2.55□□□□□ -2
CNN2-204ENST00000562075 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
CNN2-204ENST00000562075 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CNN2-204ENST00000562075 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
CNN2-204ENST00000562075 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CNN2-204ENST00000562075 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms