RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
ARHGEF40-208ENST00000557498 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
ARHGEF40-208ENST00000557498 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
ARHGEF40-208ENST00000557498 MT1GP13640 62 aa5.04□□□□□ -1.6
ARHGEF40-208ENST00000557498 SPRR2EP22531 72 aa5.03□□□□□ -1.6
ARHGEF40-208ENST00000557498 SPRR2BP35325 72 aa5.03□□□□□ -1.6
ARHGEF40-208ENST00000557498 SPRR2AP35326 72 aa5.03□□□□□ -1.6
ARHGEF40-208ENST00000557498 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
ARHGEF40-208ENST00000557498 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
ARHGEF40-208ENST00000557498 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
ARHGEF40-208ENST00000557498 MT1MQ8N339 61 aa4.99□□□□□ -1.61
ARHGEF40-208ENST00000557498 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
ARHGEF40-208ENST00000557498 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
ARHGEF40-208ENST00000557498 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
ARHGEF40-208ENST00000557498 NEBP20929 6669 aa4.86□□□□□ -1.63
ARHGEF40-208ENST00000557498 SPRR2DP22532 72 aa4.85□□□□□ -1.63
ARHGEF40-208ENST00000557498 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
ARHGEF40-208ENST00000557498 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
ARHGEF40-208ENST00000557498 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
ARHGEF40-208ENST00000557498 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
ARHGEF40-208ENST00000557498 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
ARHGEF40-208ENST00000557498 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
ARHGEF40-208ENST00000557498 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
ARHGEF40-208ENST00000557498 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
ARHGEF40-208ENST00000557498 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
ARHGEF40-208ENST00000557498 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
ARHGEF40-208ENST00000557498 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
ARHGEF40-208ENST00000557498 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
ARHGEF40-208ENST00000557498 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
ARHGEF40-208ENST00000557498 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
ARHGEF40-208ENST00000557498 MT1AP04731 61 aa4.41□□□□□ -1.7
ARHGEF40-208ENST00000557498 KRTAP5-4Q6L8H1 288 aa4.37□□□□□ -1.71
ARHGEF40-208ENST00000557498 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
ARHGEF40-208ENST00000557498 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
ARHGEF40-208ENST00000557498 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
ARHGEF40-208ENST00000557498 MT4P47944 62 aa4.2□□□□□ -1.74
ARHGEF40-208ENST00000557498 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
ARHGEF40-208ENST00000557498 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
ARHGEF40-208ENST00000557498 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
ARHGEF40-208ENST00000557498 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
ARHGEF40-208ENST00000557498 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
ARHGEF40-208ENST00000557498 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
ARHGEF40-208ENST00000557498 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
ARHGEF40-208ENST00000557498 H3BS24 57 aa4.02□□□□□ -1.77
ARHGEF40-208ENST00000557498 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
ARHGEF40-208ENST00000557498 MT3P25713 68 aa3.99□□□□□ -1.77
ARHGEF40-208ENST00000557498 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
ARHGEF40-208ENST00000557498 KRTAP5-3Q6L8H2 238 aa3.94□□□□□ -1.78
ARHGEF40-208ENST00000557498 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
ARHGEF40-208ENST00000557498 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
ARHGEF40-208ENST00000557498 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
ARHGEF40-208ENST00000557498 INE1O15225 51 aa3.72□□□□□ -1.81
ARHGEF40-208ENST00000557498 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ARHGEF40-208ENST00000557498 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
ARHGEF40-208ENST00000557498 KRTAP4-2Q9BYR5 136 aa3.63□□□□□ -1.83
ARHGEF40-208ENST00000557498 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
ARHGEF40-208ENST00000557498 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
ARHGEF40-208ENST00000557498 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
ARHGEF40-208ENST00000557498 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
ARHGEF40-208ENST00000557498 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
ARHGEF40-208ENST00000557498 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
ARHGEF40-208ENST00000557498 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.87
ARHGEF40-208ENST00000557498 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
ARHGEF40-208ENST00000557498 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
ARHGEF40-208ENST00000557498 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
ARHGEF40-208ENST00000557498 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
ARHGEF40-208ENST00000557498 PRM1P04553 51 aa3.13□□□□□ -1.91
ARHGEF40-208ENST00000557498 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
ARHGEF40-208ENST00000557498 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
ARHGEF40-208ENST00000557498 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
ARHGEF40-208ENST00000557498 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
ARHGEF40-208ENST00000557498 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
ARHGEF40-208ENST00000557498 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
ARHGEF40-208ENST00000557498 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
ARHGEF40-208ENST00000557498 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
ARHGEF40-208ENST00000557498 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
ARHGEF40-208ENST00000557498 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
ARHGEF40-208ENST00000557498 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 112 ms