RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	KRTAP10-5	P60370	271 aa		3.93	□□□□□ -1.78
HNRNPC-223	ENST00000556142	MT1X	P80297	61 aa		3.93	□□□□□ -1.78
HNRNPC-223	ENST00000556142	MUC12	Q9UKN1	5478 aa		3.9	□□□□□ -1.79
HNRNPC-223	ENST00000556142	TNP1	P09430	55 aa		3.86	□□□□□ -1.79
HNRNPC-223	ENST00000556142	MDN1	Q9NU22	5596 aa		3.79	□□□□□ -1.8
HNRNPC-223	ENST00000556142	PP632	Q6XCG6	107 aa		3.78	□□□□□ -1.8
HNRNPC-223	ENST00000556142	PRO2289	Q9P1D8	64 aa		3.78	□□□□□ -1.8
HNRNPC-223	ENST00000556142	KRTAP2-3	P0C7H8	128 aa		3.77	□□□□□ -1.81
HNRNPC-223	ENST00000556142	KRTAP2-4	Q9BYR9	128 aa		3.77	□□□□□ -1.81
HNRNPC-223	ENST00000556142	KRTAP10-7	P60409	375 aa	Predicted RBP	3.76	□□□□□ -1.81
HNRNPC-223	ENST00000556142	KRTAP5-9	P26371	169 aa		3.76	□□□□□ -1.81
HNRNPC-223	ENST00000556142	KMT2D	O14686	5537 aa		3.74	□□□□□ -1.81
HNRNPC-223	ENST00000556142	KRTAP10-12	P60413	245 aa		3.72	□□□□□ -1.81
HNRNPC-223	ENST00000556142	LCE3A	Q5TA76	89 aa		3.72	□□□□□ -1.81
HNRNPC-223	ENST00000556142	LCE1A	Q5T7P2	110 aa		3.69	□□□□□ -1.82
HNRNPC-223	ENST00000556142	KRTAP8-1	Q8IUC2	63 aa		3.67	□□□□□ -1.82
HNRNPC-223	ENST00000556142	KRTAP2-2	Q9BYT5	123 aa		3.63	□□□□□ -1.83
HNRNPC-223	ENST00000556142	KRTAP2-1	Q9BYU5	128 aa		3.63	□□□□□ -1.83
HNRNPC-223	ENST00000556142	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.63	□□□□□ -1.83
HNRNPC-223	ENST00000556142	SPRR2E	P22531	72 aa		3.61	□□□□□ -1.83
HNRNPC-223	ENST00000556142	SPRR2B	P35325	72 aa		3.61	□□□□□ -1.83
HNRNPC-223	ENST00000556142	SPRR2A	P35326	72 aa		3.61	□□□□□ -1.83
HNRNPC-223	ENST00000556142	SPRR2F	Q96RM1	72 aa		3.58	□□□□□ -1.84
HNRNPC-223	ENST00000556142	KRTAP12-3	P60328	96 aa		3.55	□□□□□ -1.84
HNRNPC-223	ENST00000556142	KRTAP19-5	Q3LI72	72 aa		3.55	□□□□□ -1.84
HNRNPC-223	ENST00000556142	GPR98	Q8WXG9	6306 aa		3.53	□□□□□ -1.84
HNRNPC-223	ENST00000556142	KRTAP19-7	Q3SYF9	63 aa		3.51	□□□□□ -1.85
HNRNPC-223	ENST00000556142	SPRR2D	P22532	72 aa		3.5	□□□□□ -1.85
HNRNPC-223	ENST00000556142	KRTAP5-11	Q6L8G4	156 aa		3.48	□□□□□ -1.85
HNRNPC-223	ENST00000556142	SPRR5	A0A1B0GTR4	108 aa		3.46	□□□□□ -1.86
HNRNPC-223	ENST00000556142	MT1E	P04732	61 aa		3.43	□□□□□ -1.86
HNRNPC-223	ENST00000556142	MT1L	Q93083	61 aa		3.38	□□□□□ -1.87
HNRNPC-223	ENST00000556142	LCE1E	Q5T753	118 aa		3.35	□□□□□ -1.87
HNRNPC-223	ENST00000556142	LCE3C	Q5T5A8	94 aa		3.34	□□□□□ -1.87
HNRNPC-223	ENST00000556142	DST	Q03001	7570 aa	Known RBP	3.32	□□□□□ -1.88
HNRNPC-223	ENST00000556142	KRTAP19-3	Q7Z4W3	81 aa		3.27	□□□□□ -1.89
HNRNPC-223	ENST00000556142	NDUFAF8	A1L188	74 aa		3.25	□□□□□ -1.89
HNRNPC-223	ENST00000556142	MT1G	P13640	62 aa		3.24	□□□□□ -1.89
HNRNPC-223	ENST00000556142	LUZP6	Q538Z0	58 aa		3.23	□□□□□ -1.89
HNRNPC-223	ENST00000556142	MT1M	Q8N339	61 aa		3.22	□□□□□ -1.89
HNRNPC-223	ENST00000556142	KRTAP9-6	A8MVA2	160 aa		3.21	□□□□□ -1.9
HNRNPC-223	ENST00000556142	MT3	P25713	68 aa		3.21	□□□□□ -1.9
HNRNPC-223	ENST00000556142	KRTAP4-3	Q9BYR4	195 aa		3.17	□□□□□ -1.9
HNRNPC-223	ENST00000556142	HMCN1	Q96RW7	5635 aa		3.14	□□□□□ -1.91
HNRNPC-223	ENST00000556142	KRTAP5-10	Q6L8G5	202 aa		3.12	□□□□□ -1.91
HNRNPC-223	ENST00000556142	AHNAK2	Q8IVF2	5795 aa		3.1	□□□□□ -1.91
HNRNPC-223	ENST00000556142	MT4	P47944	62 aa		3.08	□□□□□ -1.92
HNRNPC-223	ENST00000556142	KRTAP5-1	Q6L8H4	278 aa		3.08	□□□□□ -1.92
HNRNPC-223	ENST00000556142	KRTAP5-4	Q6L8H1	288 aa		3.07	□□□□□ -1.92
HNRNPC-223	ENST00000556142	KRTAP5-7	Q6L8G8	165 aa		3.05	□□□□□ -1.92
HNRNPC-223	ENST00000556142	KRTAP4-4	Q9BYR3	166 aa		2.99	□□□□□ -1.93
HNRNPC-223	ENST00000556142	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.93	□□□□□ -1.94
HNRNPC-223	ENST00000556142	MT1A	P04731	61 aa		2.86	□□□□□ -1.95
HNRNPC-223	ENST00000556142	KRTAP6-1	Q3LI64	71 aa		2.84	□□□□□ -1.95
HNRNPC-223	ENST00000556142		A0A0A0MQY5	61 aa		2.83	□□□□□ -1.96
HNRNPC-223	ENST00000556142	LCE1F	Q5T754	118 aa		2.82	□□□□□ -1.96
HNRNPC-223	ENST00000556142	KRTAP20-2	Q3LI61	65 aa		2.79	□□□□□ -1.96
HNRNPC-223	ENST00000556142	OBSCN	Q5VST9	7968 aa		2.75	□□□□□ -1.97
HNRNPC-223	ENST00000556142	SYNE1	Q8NF91	8797 aa	Known RBP	2.75	□□□□□ -1.97
HNRNPC-223	ENST00000556142	KRTAP5-2	Q701N4	177 aa		2.74	□□□□□ -1.97
HNRNPC-223	ENST00000556142	INE1	O15225	51 aa		2.69	□□□□□ -1.98
HNRNPC-223	ENST00000556142	AHNAK	Q09666	5890 aa	Known RBP	2.68	□□□□□ -1.98
HNRNPC-223	ENST00000556142	KRTAP12-4	P60329	112 aa		2.68	□□□□□ -1.98
HNRNPC-223	ENST00000556142	MUC5AC	P98088	5654 aa		2.64	□□□□□ -1.99
HNRNPC-223	ENST00000556142	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.62	□□□□□ -1.99
HNRNPC-223	ENST00000556142	KRTAP6-2	Q3LI66	62 aa		2.59	□□□□□ -1.99
HNRNPC-223	ENST00000556142	KRTAP5-8	O75690	187 aa		2.58	□□□□□ -2
HNRNPC-223	ENST00000556142	LCE3D	Q9BYE3	92 aa		2.5	□□□□□ -2.01
HNRNPC-223	ENST00000556142	LCE3E	Q5T5B0	92 aa		2.44	□□□□□ -2.02
HNRNPC-223	ENST00000556142	LCE1C	Q5T751	118 aa		2.18	□□□□□ -2.06
HNRNPC-223	ENST00000556142	LCE1B	Q5T7P3	118 aa		2.18	□□□□□ -2.06
HNRNPC-223	ENST00000556142	PRM1	P04553	51 aa		2.16	□□□□□ -2.06
HNRNPC-223	ENST00000556142	KRTAP21-2	Q3LI59	83 aa		1.88	□□□□□ -2.11
HNRNPC-223	ENST00000556142	MUC19	Q7Z5P9	8384 aa		1.87	□□□□□ -2.11
HNRNPC-223	ENST00000556142	PHGR1	C9JFL3	82 aa		1.85	□□□□□ -2.11
HNRNPC-223	ENST00000556142	KRTAP21-1	Q3LI58	79 aa		1.41	□□□□□ -2.18
HNRNPC-223	ENST00000556142	MUC16	Q8WXI7	14507 aa		1.1	□□□□□ -2.23

Retrieved 77 of 20,778 RNA–protein pairs in 234.4 ms