RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 FCGBPQ9Y6R7 5405 aaPredicted RBP1.81□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP19-6Q3LI70 58 aa1.8□□□□□ -2.12
LINC00648-202ENST00000555985 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
LINC00648-202ENST00000555985 SPRR2GQ9BYE4 73 aa1.78□□□□□ -2.12
LINC00648-202ENST00000555985 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
LINC00648-202ENST00000555985 MT1BP07438 61 aa1.77□□□□□ -2.13
LINC00648-202ENST00000555985 M0QZ58 72 aa1.76□□□□□ -2.13
LINC00648-202ENST00000555985 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
LINC00648-202ENST00000555985 R4GN34 69 aa1.72□□□□□ -2.13
LINC00648-202ENST00000555985 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
LINC00648-202ENST00000555985 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
LINC00648-202ENST00000555985 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
LINC00648-202ENST00000555985 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
LINC00648-202ENST00000555985 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
LINC00648-202ENST00000555985 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
LINC00648-202ENST00000555985 MT1XP80297 61 aa1.66□□□□□ -2.14
LINC00648-202ENST00000555985 OBSCNQ5VST9 7968 aa1.66□□□□□ -2.14
LINC00648-202ENST00000555985 KRTAP2-2Q9BYT5 123 aa1.65□□□□□ -2.15
LINC00648-202ENST00000555985 MT3P25713 68 aa1.63□□□□□ -2.15
LINC00648-202ENST00000555985 INE1O15225 51 aa1.62□□□□□ -2.15
LINC00648-202ENST00000555985 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
LINC00648-202ENST00000555985 KMT2DO14686 5537 aa1.6□□□□□ -2.15
LINC00648-202ENST00000555985 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
LINC00648-202ENST00000555985 KRTAP10-12P60413 245 aa1.59□□□□□ -2.16
LINC00648-202ENST00000555985 LCE1EQ5T753 118 aa1.59□□□□□ -2.16
LINC00648-202ENST00000555985 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
LINC00648-202ENST00000555985 TNP1P09430 55 aa1.57□□□□□ -2.16
LINC00648-202ENST00000555985 KRTAP5-5Q701N2 237 aaPredicted RBP1.57□□□□□ -2.16
LINC00648-202ENST00000555985 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
LINC00648-202ENST00000555985 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.17
LINC00648-202ENST00000555985 KRTAP8-1Q8IUC2 63 aa1.52□□□□□ -2.17
LINC00648-202ENST00000555985 SPRR2FQ96RM1 72 aa1.51□□□□□ -2.17
LINC00648-202ENST00000555985 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
LINC00648-202ENST00000555985 KRTAP19-7Q3SYF9 63 aa1.49□□□□□ -2.17
LINC00648-202ENST00000555985 SPRR2EP22531 72 aa1.49□□□□□ -2.17
LINC00648-202ENST00000555985 SPRR2BP35325 72 aa1.49□□□□□ -2.17
LINC00648-202ENST00000555985 SPRR2AP35326 72 aa1.49□□□□□ -2.17
LINC00648-202ENST00000555985 KRTAP4-3Q9BYR4 195 aa1.48□□□□□ -2.17
LINC00648-202ENST00000555985 LCE3AQ5TA76 89 aa1.46□□□□□ -2.18
LINC00648-202ENST00000555985 MT1EP04732 61 aa1.46□□□□□ -2.18
LINC00648-202ENST00000555985 LCE3CQ5T5A8 94 aa1.45□□□□□ -2.18
LINC00648-202ENST00000555985 SPRR2DP22532 72 aa1.44□□□□□ -2.18
LINC00648-202ENST00000555985 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
LINC00648-202ENST00000555985 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
LINC00648-202ENST00000555985 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
LINC00648-202ENST00000555985 MT1LQ93083 61 aa1.4□□□□□ -2.19
LINC00648-202ENST00000555985 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
LINC00648-202ENST00000555985 MT1GP13640 62 aa1.39□□□□□ -2.19
LINC00648-202ENST00000555985 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
LINC00648-202ENST00000555985 KRTAP12-3P60328 96 aa1.38□□□□□ -2.19
LINC00648-202ENST00000555985 MT1MQ8N339 61 aa1.38□□□□□ -2.19
LINC00648-202ENST00000555985 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
LINC00648-202ENST00000555985 KRTAP9-6A8MVA2 160 aa1.33□□□□□ -2.2
LINC00648-202ENST00000555985 MT4P47944 62 aa1.24□□□□□ -2.21
LINC00648-202ENST00000555985 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
LINC00648-202ENST00000555985 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
LINC00648-202ENST00000555985 MT1AP04731 61 aa1.19□□□□□ -2.22
LINC00648-202ENST00000555985 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
LINC00648-202ENST00000555985 LCE3DQ9BYE3 92 aa1.18□□□□□ -2.22
LINC00648-202ENST00000555985 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
LINC00648-202ENST00000555985 PRM1P04553 51 aa1.09□□□□□ -2.24
LINC00648-202ENST00000555985 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
LINC00648-202ENST00000555985 LCE1CQ5T751 118 aa1□□□□□ -2.25
LINC00648-202ENST00000555985 LCE1BQ5T7P3 118 aa1□□□□□ -2.25
LINC00648-202ENST00000555985 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
LINC00648-202ENST00000555985 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
LINC00648-202ENST00000555985 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
LINC00648-202ENST00000555985 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 39.5 ms