RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 MT1LQ93083 61 aa5.77□□□□□ -1.49
PPP4R3A-208ENST00000555462 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
PPP4R3A-208ENST00000555462 MT1GP13640 62 aa5.73□□□□□ -1.49
PPP4R3A-208ENST00000555462 MT1EP04732 61 aa5.72□□□□□ -1.49
PPP4R3A-208ENST00000555462 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
PPP4R3A-208ENST00000555462 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
PPP4R3A-208ENST00000555462 KRTAP2-1Q9BYU5 128 aa5.7□□□□□ -1.5
PPP4R3A-208ENST00000555462 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
PPP4R3A-208ENST00000555462 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
PPP4R3A-208ENST00000555462 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
PPP4R3A-208ENST00000555462 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.53
PPP4R3A-208ENST00000555462 KRTAP12-4P60329 112 aa5.46□□□□□ -1.53
PPP4R3A-208ENST00000555462 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
PPP4R3A-208ENST00000555462 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
PPP4R3A-208ENST00000555462 MT1MQ8N339 61 aa5.36□□□□□ -1.55
PPP4R3A-208ENST00000555462 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
PPP4R3A-208ENST00000555462 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
PPP4R3A-208ENST00000555462 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
PPP4R3A-208ENST00000555462 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
PPP4R3A-208ENST00000555462 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
PPP4R3A-208ENST00000555462 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
PPP4R3A-208ENST00000555462 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
PPP4R3A-208ENST00000555462 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
PPP4R3A-208ENST00000555462 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
PPP4R3A-208ENST00000555462 PRM1P04553 51 aa4.88□□□□□ -1.63
PPP4R3A-208ENST00000555462 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
PPP4R3A-208ENST00000555462 KRTAP5-5Q701N2 237 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-208ENST00000555462 MT1AP04731 61 aa4.7□□□□□ -1.66
PPP4R3A-208ENST00000555462 SPRR2EP22531 72 aa4.69□□□□□ -1.66
PPP4R3A-208ENST00000555462 SPRR2BP35325 72 aa4.69□□□□□ -1.66
PPP4R3A-208ENST00000555462 SPRR2AP35326 72 aa4.69□□□□□ -1.66
PPP4R3A-208ENST00000555462 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
PPP4R3A-208ENST00000555462 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
PPP4R3A-208ENST00000555462 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
PPP4R3A-208ENST00000555462 SPRR2DP22532 72 aa4.43□□□□□ -1.7
PPP4R3A-208ENST00000555462 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
PPP4R3A-208ENST00000555462 MT3P25713 68 aa4.27□□□□□ -1.73
PPP4R3A-208ENST00000555462 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
PPP4R3A-208ENST00000555462 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
PPP4R3A-208ENST00000555462 MT4P47944 62 aa4.21□□□□□ -1.74
PPP4R3A-208ENST00000555462 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
PPP4R3A-208ENST00000555462 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
PPP4R3A-208ENST00000555462 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
PPP4R3A-208ENST00000555462 NEBP20929 6669 aa4.01□□□□□ -1.77
PPP4R3A-208ENST00000555462 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
PPP4R3A-208ENST00000555462 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
PPP4R3A-208ENST00000555462 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
PPP4R3A-208ENST00000555462 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
PPP4R3A-208ENST00000555462 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
PPP4R3A-208ENST00000555462 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
PPP4R3A-208ENST00000555462 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
PPP4R3A-208ENST00000555462 KRTAP20-2Q3LI61 65 aa3.76□□□□□ -1.81
PPP4R3A-208ENST00000555462 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
PPP4R3A-208ENST00000555462 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
PPP4R3A-208ENST00000555462 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
PPP4R3A-208ENST00000555462 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
PPP4R3A-208ENST00000555462 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
PPP4R3A-208ENST00000555462 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
PPP4R3A-208ENST00000555462 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PPP4R3A-208ENST00000555462 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
PPP4R3A-208ENST00000555462 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
PPP4R3A-208ENST00000555462 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
PPP4R3A-208ENST00000555462 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
PPP4R3A-208ENST00000555462 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PPP4R3A-208ENST00000555462 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
PPP4R3A-208ENST00000555462 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
PPP4R3A-208ENST00000555462 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PPP4R3A-208ENST00000555462 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
PPP4R3A-208ENST00000555462 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
PPP4R3A-208ENST00000555462 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PPP4R3A-208ENST00000555462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PPP4R3A-208ENST00000555462 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -1.99
PPP4R3A-208ENST00000555462 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
PPP4R3A-208ENST00000555462 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
PPP4R3A-208ENST00000555462 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
PPP4R3A-208ENST00000555462 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
PPP4R3A-208ENST00000555462 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 67.4 ms