RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
HNRNPC-219ENST00000555309 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
HNRNPC-219ENST00000555309 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
HNRNPC-219ENST00000555309 MT1XP80297 61 aa4.21□□□□□ -1.73
HNRNPC-219ENST00000555309 CAMK2N1Q7Z7J9 78 aa4.21□□□□□ -1.73
HNRNPC-219ENST00000555309 KRTAP5-9P26371 169 aa4.18□□□□□ -1.74
HNRNPC-219ENST00000555309 PLAC4Q8WY50 150 aa4.15□□□□□ -1.74
HNRNPC-219ENST00000555309 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
HNRNPC-219ENST00000555309 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
HNRNPC-219ENST00000555309 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
HNRNPC-219ENST00000555309 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
HNRNPC-219ENST00000555309 TNP1P09430 55 aa4.07□□□□□ -1.76
HNRNPC-219ENST00000555309 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
HNRNPC-219ENST00000555309 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
HNRNPC-219ENST00000555309 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
HNRNPC-219ENST00000555309 SPRR2EP22531 72 aa4.01□□□□□ -1.77
HNRNPC-219ENST00000555309 SPRR2BP35325 72 aa4.01□□□□□ -1.77
HNRNPC-219ENST00000555309 SPRR2AP35326 72 aa4.01□□□□□ -1.77
HNRNPC-219ENST00000555309 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
HNRNPC-219ENST00000555309 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
HNRNPC-219ENST00000555309 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
HNRNPC-219ENST00000555309 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
HNRNPC-219ENST00000555309 SPRR2DP22532 72 aa3.87□□□□□ -1.79
HNRNPC-219ENST00000555309 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
HNRNPC-219ENST00000555309 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
HNRNPC-219ENST00000555309 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
HNRNPC-219ENST00000555309 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
HNRNPC-219ENST00000555309 INE1O15225 51 aa3.73□□□□□ -1.81
HNRNPC-219ENST00000555309 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
HNRNPC-219ENST00000555309 MT1EP04732 61 aa3.73□□□□□ -1.81
HNRNPC-219ENST00000555309 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
HNRNPC-219ENST00000555309 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
HNRNPC-219ENST00000555309 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
HNRNPC-219ENST00000555309 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
HNRNPC-219ENST00000555309 MT1GP13640 62 aa3.56□□□□□ -1.84
HNRNPC-219ENST00000555309 MT1LQ93083 61 aa3.56□□□□□ -1.84
HNRNPC-219ENST00000555309 MT1MQ8N339 61 aa3.55□□□□□ -1.84
HNRNPC-219ENST00000555309 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
HNRNPC-219ENST00000555309 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
HNRNPC-219ENST00000555309 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
HNRNPC-219ENST00000555309 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
HNRNPC-219ENST00000555309 MT4P47944 62 aa3.42□□□□□ -1.86
HNRNPC-219ENST00000555309 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
HNRNPC-219ENST00000555309 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
HNRNPC-219ENST00000555309 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
HNRNPC-219ENST00000555309 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
HNRNPC-219ENST00000555309 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
HNRNPC-219ENST00000555309 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
HNRNPC-219ENST00000555309 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
HNRNPC-219ENST00000555309 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
HNRNPC-219ENST00000555309 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
HNRNPC-219ENST00000555309 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
HNRNPC-219ENST00000555309 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
HNRNPC-219ENST00000555309 MT1AP04731 61 aa3.01□□□□□ -1.93
HNRNPC-219ENST00000555309 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
HNRNPC-219ENST00000555309 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
HNRNPC-219ENST00000555309 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
HNRNPC-219ENST00000555309 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
HNRNPC-219ENST00000555309 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
HNRNPC-219ENST00000555309 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
HNRNPC-219ENST00000555309 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
HNRNPC-219ENST00000555309 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
HNRNPC-219ENST00000555309 MT3P25713 68 aa2.73□□□□□ -1.97
HNRNPC-219ENST00000555309 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
HNRNPC-219ENST00000555309 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
HNRNPC-219ENST00000555309 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
HNRNPC-219ENST00000555309 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
HNRNPC-219ENST00000555309 LCE3EQ5T5B0 92 aa2.59□□□□□ -2
HNRNPC-219ENST00000555309 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
HNRNPC-219ENST00000555309 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
HNRNPC-219ENST00000555309 PRM1P04553 51 aa2.3□□□□□ -2.04
HNRNPC-219ENST00000555309 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
HNRNPC-219ENST00000555309 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
HNRNPC-219ENST00000555309 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
HNRNPC-219ENST00000555309 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
HNRNPC-219ENST00000555309 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
HNRNPC-219ENST00000555309 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.3 ms