RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
PCNX1-209ENST00000554879 MT1EP04732 61 aa5.76□□□□□ -1.49
PCNX1-209ENST00000554879 MT1LQ93083 61 aa5.71□□□□□ -1.5
PCNX1-209ENST00000554879 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
PCNX1-209ENST00000554879 DSTQ03001 7570 aaKnown RBP5.63□□□□□ -1.51
PCNX1-209ENST00000554879 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
PCNX1-209ENST00000554879 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
PCNX1-209ENST00000554879 MT1GP13640 62 aa5.59□□□□□ -1.52
PCNX1-209ENST00000554879 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.52
PCNX1-209ENST00000554879 SPRR2EP22531 72 aa5.58□□□□□ -1.52
PCNX1-209ENST00000554879 SPRR2BP35325 72 aa5.58□□□□□ -1.52
PCNX1-209ENST00000554879 SPRR2AP35326 72 aa5.58□□□□□ -1.52
PCNX1-209ENST00000554879 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
PCNX1-209ENST00000554879 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
PCNX1-209ENST00000554879 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
PCNX1-209ENST00000554879 MT1MQ8N339 61 aa5.47□□□□□ -1.53
PCNX1-209ENST00000554879 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
PCNX1-209ENST00000554879 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
PCNX1-209ENST00000554879 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
PCNX1-209ENST00000554879 SPRR2DP22532 72 aa5.35□□□□□ -1.55
PCNX1-209ENST00000554879 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
PCNX1-209ENST00000554879 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
PCNX1-209ENST00000554879 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
PCNX1-209ENST00000554879 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
PCNX1-209ENST00000554879 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
PCNX1-209ENST00000554879 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
PCNX1-209ENST00000554879 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
PCNX1-209ENST00000554879 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
PCNX1-209ENST00000554879 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
PCNX1-209ENST00000554879 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
PCNX1-209ENST00000554879 PRM1P04553 51 aa5.04□□□□□ -1.6
PCNX1-209ENST00000554879 KRTAP5-9P26371 169 aa5.03□□□□□ -1.61
PCNX1-209ENST00000554879 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
PCNX1-209ENST00000554879 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
PCNX1-209ENST00000554879 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
PCNX1-209ENST00000554879 MT1AP04731 61 aa4.84□□□□□ -1.63
PCNX1-209ENST00000554879 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
PCNX1-209ENST00000554879 MT4P47944 62 aa4.82□□□□□ -1.64
PCNX1-209ENST00000554879 MUC19Q7Z5P9 8384 aa4.66□□□□□ -1.66
PCNX1-209ENST00000554879 NEBP20929 6669 aa4.66□□□□□ -1.66
PCNX1-209ENST00000554879 MT3P25713 68 aa4.6□□□□□ -1.67
PCNX1-209ENST00000554879 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
PCNX1-209ENST00000554879 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
PCNX1-209ENST00000554879 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
PCNX1-209ENST00000554879 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
PCNX1-209ENST00000554879 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
PCNX1-209ENST00000554879 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
PCNX1-209ENST00000554879 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
PCNX1-209ENST00000554879 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
PCNX1-209ENST00000554879 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
PCNX1-209ENST00000554879 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
PCNX1-209ENST00000554879 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
PCNX1-209ENST00000554879 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
PCNX1-209ENST00000554879 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
PCNX1-209ENST00000554879 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
PCNX1-209ENST00000554879 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
PCNX1-209ENST00000554879 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
PCNX1-209ENST00000554879 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
PCNX1-209ENST00000554879 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
PCNX1-209ENST00000554879 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
PCNX1-209ENST00000554879 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
PCNX1-209ENST00000554879 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
PCNX1-209ENST00000554879 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
PCNX1-209ENST00000554879 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
PCNX1-209ENST00000554879 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
PCNX1-209ENST00000554879 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
PCNX1-209ENST00000554879 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
PCNX1-209ENST00000554879 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
PCNX1-209ENST00000554879 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
PCNX1-209ENST00000554879 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
PCNX1-209ENST00000554879 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
PCNX1-209ENST00000554879 KRTAP5-7Q6L8G8 165 aa2.89□□□□□ -1.95
PCNX1-209ENST00000554879 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
PCNX1-209ENST00000554879 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
PCNX1-209ENST00000554879 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
PCNX1-209ENST00000554879 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
PCNX1-209ENST00000554879 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
PCNX1-209ENST00000554879 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms