RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 C9JAW5 83 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 TAX1BP3O14907 124 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 NREPQ16612 68 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 KRTAP6-2Q3LI66 62 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 LINC01545Q5VT33 79 aa0.34□□□□□ -2.35
PRPF39-208ENST00000554785 TMEM256-PLSCR3K7ERE1 68 aa0.34□□□□□ -2.36
PRPF39-208ENST00000554785 KRTAP6-1Q3LI64 71 aa0.34□□□□□ -2.36
PRPF39-208ENST00000554785 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 H0YGX0 51 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 C14orf144Q96I85 54 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 SPCS1Q9Y6A9 102 aa0.33□□□□□ -2.36
PRPF39-208ENST00000554785 ROMO1P60602 79 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 HIST1H2BKO60814 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 HIST1H2BJP06899 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 ACYP1P07311 99 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 C20orf197Q8N268 126 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 SVBPQ8N300 66 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 PRO1854Q9UHT4 67 aa0.32□□□□□ -2.36
PRPF39-208ENST00000554785 COX6CP09669 75 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 CYP4F30PQ9H0H9 118 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 TRAV22A0A0B4J277 110 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 A0A1B0GX51 115 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 CLLU1Q5K131 121 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
PRPF39-208ENST00000554785 F8W1H4 67 aa0.3□□□□□ -2.36
PRPF39-208ENST00000554785 SPATA8Q6RVD6 105 aa0.3□□□□□ -2.36
PRPF39-208ENST00000554785 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 JMJD7-PLA2G4BH0Y9G9 81 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 H0Y9P7 68 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 MT1AP04731 61 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 COX8AP10176 69 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 COX7CP15954 63 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 SPATA45Q537H7 98 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 LOC101927531A0A1B0GV80 90 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 ATXN8Q156A1 80 aa0.29□□□□□ -2.36
PRPF39-208ENST00000554785 VAMP8Q9BV40 100 aa0.28□□□□□ -2.36
PRPF39-208ENST00000554785 TNP1P09430 55 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 SMIM20Q8N5G0 67 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 UBL5Q9BZL1 73 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 HIGD1BQ9P298 99 aa0.28□□□□□ -2.37
PRPF39-208ENST00000554785 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
PRPF39-208ENST00000554785 HSD52Q0P140 79 aa0.26□□□□□ -2.37
PRPF39-208ENST00000554785 DMAC1Q96GE9 116 aa0.26□□□□□ -2.37
PRPF39-208ENST00000554785 S100A1P23297 94 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 ATOX1O00244 68 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 DLEU1O43261 78 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 ACYP2P14621 99 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 MIR22HGQ0VDD5 57 aa0.25□□□□□ -2.37
PRPF39-208ENST00000554785 UQCRQO14949 82 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SCGB1A1P11684 91 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 PYY3Q5JQD4 70 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SPTSSBQ8NFR3 76 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 UQCR10Q9UDW1 63 aa0.23□□□□□ -2.37
PRPF39-208ENST00000554785 SERP2Q8N6R1 65 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 SERP1Q9Y6X1 66 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 ETDBQ3ZM63 59 aa0.22□□□□□ -2.37
PRPF39-208ENST00000554785 M0R143 59 aa0.21□□□□□ -2.38
PRPF39-208ENST00000554785 KRTAP21-1Q3LI58 79 aa0.2□□□□□ -2.38
PRPF39-208ENST00000554785 A0A1B0GU69 56 aa0.19□□□□□ -2.38
PRPF39-208ENST00000554785 H7BZZ5 65 aa0.18□□□□□ -2.38
PRPF39-208ENST00000554785 BRK1Q8WUW1 75 aa0.18□□□□□ -2.38
PRPF39-208ENST00000554785 ATP5EP2Q5VTU8 51 aa0.17□□□□□ -2.38
PRPF39-208ENST00000554785 RPS28P62857 69 aaKnown RBP0.17□□□□□ -2.38
PRPF39-208ENST00000554785 LINC00643Q86TS7 51 aa0.16□□□□□ -2.38
PRPF39-208ENST00000554785 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
PRPF39-208ENST00000554785 COL5A1-AS1Q5SY13 56 aa0.15□□□□□ -2.39
PRPF39-208ENST00000554785 GTF2H5Q6ZYL4 71 aa0.15□□□□□ -2.39
PRPF39-208ENST00000554785 UQCR11O14957 56 aa0.13□□□□□ -2.39
PRPF39-208ENST00000554785 SMIM6P0DI80 62 aa0.12□□□□□ -2.39
PRPF39-208ENST00000554785 A0A1B0GV90 55 aa0.1□□□□□ -2.39
PRPF39-208ENST00000554785 J3QR89 54 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 LINC01558Q9Y6Z2 57 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 PRM1P04553 51 aa0.08□□□□□ -2.4
PRPF39-208ENST00000554785 CCDC179H3BU77 68 aa0.07□□□□□ -2.4
PRPF39-208ENST00000554785 LOC105371267A0A1B0GV96 52 aa0.06□□□□□ -2.4
PRPF39-208ENST00000554785 K7ERU9 68 aa0.04□□□□□ -2.4
PRPF39-208ENST00000554785 ATP5EP56381 51 aaPredicted RBP0.01□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 41.5 ms