RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
VTI1B-204ENST00000554659 MT3P25713 68 aa4.25□□□□□ -1.73
VTI1B-204ENST00000554659 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
VTI1B-204ENST00000554659 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
VTI1B-204ENST00000554659 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
VTI1B-204ENST00000554659 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
VTI1B-204ENST00000554659 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
VTI1B-204ENST00000554659 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
VTI1B-204ENST00000554659 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
VTI1B-204ENST00000554659 MT4P47944 62 aa4.13□□□□□ -1.75
VTI1B-204ENST00000554659 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
VTI1B-204ENST00000554659 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
VTI1B-204ENST00000554659 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
VTI1B-204ENST00000554659 UBR4Q5T4S7 5183 aa4.12□□□□□ -1.75
VTI1B-204ENST00000554659 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
VTI1B-204ENST00000554659 MT1AP04731 61 aa4.07□□□□□ -1.76
VTI1B-204ENST00000554659 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
VTI1B-204ENST00000554659 LCE2AQ5TA79 106 aaPredicted RBP4□□□□□ -1.77
VTI1B-204ENST00000554659 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
VTI1B-204ENST00000554659 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
VTI1B-204ENST00000554659 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
VTI1B-204ENST00000554659 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.78
VTI1B-204ENST00000554659 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
VTI1B-204ENST00000554659 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.8
VTI1B-204ENST00000554659 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
VTI1B-204ENST00000554659 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
VTI1B-204ENST00000554659 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
VTI1B-204ENST00000554659 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
VTI1B-204ENST00000554659 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
VTI1B-204ENST00000554659 USH2AO75445 5202 aa3.72□□□□□ -1.81
VTI1B-204ENST00000554659 KMT2DO14686 5537 aa3.67□□□□□ -1.82
VTI1B-204ENST00000554659 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
VTI1B-204ENST00000554659 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
VTI1B-204ENST00000554659 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
VTI1B-204ENST00000554659 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
VTI1B-204ENST00000554659 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
VTI1B-204ENST00000554659 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
VTI1B-204ENST00000554659 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
VTI1B-204ENST00000554659 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
VTI1B-204ENST00000554659 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
VTI1B-204ENST00000554659 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
VTI1B-204ENST00000554659 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
VTI1B-204ENST00000554659 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.86
VTI1B-204ENST00000554659 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
VTI1B-204ENST00000554659 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
VTI1B-204ENST00000554659 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
VTI1B-204ENST00000554659 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
VTI1B-204ENST00000554659 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
VTI1B-204ENST00000554659 KRTAP5-9P26371 169 aa3.15□□□□□ -1.9
VTI1B-204ENST00000554659 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
VTI1B-204ENST00000554659 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
VTI1B-204ENST00000554659 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
VTI1B-204ENST00000554659 NEBP20929 6669 aa2.94□□□□□ -1.94
VTI1B-204ENST00000554659 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
VTI1B-204ENST00000554659 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
VTI1B-204ENST00000554659 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
VTI1B-204ENST00000554659 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
VTI1B-204ENST00000554659 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
VTI1B-204ENST00000554659 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
VTI1B-204ENST00000554659 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
VTI1B-204ENST00000554659 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
VTI1B-204ENST00000554659 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
VTI1B-204ENST00000554659 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
VTI1B-204ENST00000554659 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
VTI1B-204ENST00000554659 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
VTI1B-204ENST00000554659 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
VTI1B-204ENST00000554659 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
VTI1B-204ENST00000554659 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
VTI1B-204ENST00000554659 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
VTI1B-204ENST00000554659 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
VTI1B-204ENST00000554659 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
VTI1B-204ENST00000554659 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
VTI1B-204ENST00000554659 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
VTI1B-204ENST00000554659 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
VTI1B-204ENST00000554659 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
VTI1B-204ENST00000554659 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
VTI1B-204ENST00000554659 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms