RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
SMARCC2-214ENST00000552674 MT1EP04732 61 aa3.14□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
SMARCC2-214ENST00000552674 LOC100996750A0A140TA64 210 aa3.11□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
SMARCC2-214ENST00000552674 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SMARCC2-214ENST00000552674 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
SMARCC2-214ENST00000552674 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
SMARCC2-214ENST00000552674 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
SMARCC2-214ENST00000552674 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
SMARCC2-214ENST00000552674 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.93
SMARCC2-214ENST00000552674 MT1MQ8N339 61 aa2.96□□□□□ -1.94
SMARCC2-214ENST00000552674 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
SMARCC2-214ENST00000552674 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
SMARCC2-214ENST00000552674 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
SMARCC2-214ENST00000552674 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
SMARCC2-214ENST00000552674 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SMARCC2-214ENST00000552674 PRM1P04553 51 aa2.77□□□□□ -1.97
SMARCC2-214ENST00000552674 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
SMARCC2-214ENST00000552674 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
SMARCC2-214ENST00000552674 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
SMARCC2-214ENST00000552674 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
SMARCC2-214ENST00000552674 SPRR2EP22531 72 aa2.7□□□□□ -1.98
SMARCC2-214ENST00000552674 SPRR2BP35325 72 aa2.7□□□□□ -1.98
SMARCC2-214ENST00000552674 SPRR2AP35326 72 aa2.7□□□□□ -1.98
SMARCC2-214ENST00000552674 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
SMARCC2-214ENST00000552674 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
SMARCC2-214ENST00000552674 MT1AP04731 61 aa2.67□□□□□ -1.98
SMARCC2-214ENST00000552674 MDN1Q9NU22 5596 aa2.59□□□□□ -2
SMARCC2-214ENST00000552674 SPRR2DP22532 72 aa2.57□□□□□ -2
SMARCC2-214ENST00000552674 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
SMARCC2-214ENST00000552674 KRTAP5-9P26371 169 aa2.55□□□□□ -2
SMARCC2-214ENST00000552674 MT3P25713 68 aa2.52□□□□□ -2.01
SMARCC2-214ENST00000552674 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
SMARCC2-214ENST00000552674 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
SMARCC2-214ENST00000552674 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
SMARCC2-214ENST00000552674 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
SMARCC2-214ENST00000552674 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.45□□□□□ -2.02
SMARCC2-214ENST00000552674 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SMARCC2-214ENST00000552674 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
SMARCC2-214ENST00000552674 MT4P47944 62 aa2.37□□□□□ -2.03
SMARCC2-214ENST00000552674 KRTAP2-2Q9BYT5 123 aa2.35□□□□□ -2.03
SMARCC2-214ENST00000552674 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SMARCC2-214ENST00000552674 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
SMARCC2-214ENST00000552674 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SMARCC2-214ENST00000552674 NEBP20929 6669 aa2.29□□□□□ -2.04
SMARCC2-214ENST00000552674 LCE1DQ5T752 114 aa2.29□□□□□ -2.04
SMARCC2-214ENST00000552674 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
SMARCC2-214ENST00000552674 GPR98Q8WXG9 6306 aa2.27□□□□□ -2.05
SMARCC2-214ENST00000552674 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
SMARCC2-214ENST00000552674 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
SMARCC2-214ENST00000552674 KRTAP20-1Q3LI63 56 aa2.2□□□□□ -2.06
SMARCC2-214ENST00000552674 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
SMARCC2-214ENST00000552674 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
SMARCC2-214ENST00000552674 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
SMARCC2-214ENST00000552674 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
SMARCC2-214ENST00000552674 LCE1FQ5T754 118 aa2.03□□□□□ -2.08
SMARCC2-214ENST00000552674 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
SMARCC2-214ENST00000552674 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
SMARCC2-214ENST00000552674 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.09
SMARCC2-214ENST00000552674 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
SMARCC2-214ENST00000552674 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
SMARCC2-214ENST00000552674 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SMARCC2-214ENST00000552674 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
SMARCC2-214ENST00000552674 KRTAP5-7Q6L8G8 165 aa1.71□□□□□ -2.13
SMARCC2-214ENST00000552674 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
SMARCC2-214ENST00000552674 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
SMARCC2-214ENST00000552674 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
SMARCC2-214ENST00000552674 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.62□□□□□ -2.15
SMARCC2-214ENST00000552674 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
SMARCC2-214ENST00000552674 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SMARCC2-214ENST00000552674 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SMARCC2-214ENST00000552674 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SMARCC2-214ENST00000552674 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
SMARCC2-214ENST00000552674 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms