RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
TGFBR1-209ENST00000552516 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
TGFBR1-209ENST00000552516 SPRR2EP22531 72 aa3.69□□□□□ -1.82
TGFBR1-209ENST00000552516 SPRR2BP35325 72 aa3.69□□□□□ -1.82
TGFBR1-209ENST00000552516 SPRR2AP35326 72 aa3.69□□□□□ -1.82
TGFBR1-209ENST00000552516 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
TGFBR1-209ENST00000552516 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
TGFBR1-209ENST00000552516 MT1LQ93083 61 aa3.62□□□□□ -1.83
TGFBR1-209ENST00000552516 MT1EP04732 61 aa3.62□□□□□ -1.83
TGFBR1-209ENST00000552516 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.84
TGFBR1-209ENST00000552516 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
TGFBR1-209ENST00000552516 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
TGFBR1-209ENST00000552516 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
TGFBR1-209ENST00000552516 SPRR2DP22532 72 aa3.51□□□□□ -1.85
TGFBR1-209ENST00000552516 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
TGFBR1-209ENST00000552516 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
TGFBR1-209ENST00000552516 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
TGFBR1-209ENST00000552516 MT1MQ8N339 61 aa3.47□□□□□ -1.85
TGFBR1-209ENST00000552516 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
TGFBR1-209ENST00000552516 MT4P47944 62 aa3.37□□□□□ -1.87
TGFBR1-209ENST00000552516 LCE2DQ5TA82 110 aaPredicted RBP3.36□□□□□ -1.87
TGFBR1-209ENST00000552516 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
TGFBR1-209ENST00000552516 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
TGFBR1-209ENST00000552516 KRTAP9-6A0A140TA67 174 aa3.22□□□□□ -1.89
TGFBR1-209ENST00000552516 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
TGFBR1-209ENST00000552516 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
TGFBR1-209ENST00000552516 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
TGFBR1-209ENST00000552516 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
TGFBR1-209ENST00000552516 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
TGFBR1-209ENST00000552516 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
TGFBR1-209ENST00000552516 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
TGFBR1-209ENST00000552516 KRTAP2-1Q9BYU5 128 aa3.12□□□□□ -1.91
TGFBR1-209ENST00000552516 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
TGFBR1-209ENST00000552516 PRM1P04553 51 aa3.06□□□□□ -1.92
TGFBR1-209ENST00000552516 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
TGFBR1-209ENST00000552516 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
TGFBR1-209ENST00000552516 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
TGFBR1-209ENST00000552516 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
TGFBR1-209ENST00000552516 MT1AP04731 61 aa3.02□□□□□ -1.93
TGFBR1-209ENST00000552516 MT3P25713 68 aa2.98□□□□□ -1.93
TGFBR1-209ENST00000552516 NEBP20929 6669 aa2.92□□□□□ -1.94
TGFBR1-209ENST00000552516 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
TGFBR1-209ENST00000552516 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
TGFBR1-209ENST00000552516 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
TGFBR1-209ENST00000552516 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.96
TGFBR1-209ENST00000552516 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
TGFBR1-209ENST00000552516 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
TGFBR1-209ENST00000552516 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
TGFBR1-209ENST00000552516 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
TGFBR1-209ENST00000552516 LCE1CQ5T751 118 aa2.55□□□□□ -2
TGFBR1-209ENST00000552516 LCE1EQ5T753 118 aa2.55□□□□□ -2
TGFBR1-209ENST00000552516 LCE1FQ5T754 118 aa2.55□□□□□ -2
TGFBR1-209ENST00000552516 LCE4AQ5TA78 99 aa2.55□□□□□ -2
TGFBR1-209ENST00000552516 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
TGFBR1-209ENST00000552516 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
TGFBR1-209ENST00000552516 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
TGFBR1-209ENST00000552516 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
TGFBR1-209ENST00000552516 KRTAP4-11Q9BYQ6 195 aa2.43□□□□□ -2.02
TGFBR1-209ENST00000552516 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
TGFBR1-209ENST00000552516 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
TGFBR1-209ENST00000552516 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
TGFBR1-209ENST00000552516 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
TGFBR1-209ENST00000552516 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
TGFBR1-209ENST00000552516 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
TGFBR1-209ENST00000552516 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
TGFBR1-209ENST00000552516 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
TGFBR1-209ENST00000552516 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
TGFBR1-209ENST00000552516 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
TGFBR1-209ENST00000552516 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
TGFBR1-209ENST00000552516 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
TGFBR1-209ENST00000552516 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
TGFBR1-209ENST00000552516 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
TGFBR1-209ENST00000552516 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
TGFBR1-209ENST00000552516 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
TGFBR1-209ENST00000552516 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
TGFBR1-209ENST00000552516 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
TGFBR1-209ENST00000552516 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 130.6 ms