RNA–Protein interactions for RNA: ENST00000551604.2

CUX2-203, Transcript of cut like homeobox 2, humanhuman

TSL 5

Gene CUX2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-203ENST00000551604 SNHG12Q9BXW3 62 aa1.16□□□□□ -2.22
CUX2-203ENST00000551604 Q6JHZ5 121 aa1.15□□□□□ -2.23
CUX2-203ENST00000551604 C14orf144Q96I85 54 aa1.14□□□□□ -2.23
CUX2-203ENST00000551604 COX8AP10176 69 aa1.13□□□□□ -2.23
CUX2-203ENST00000551604 BVES-AS1Q5T3Y7 98 aa1.13□□□□□ -2.23
CUX2-203ENST00000551604 LINC00472Q9H8W2 130 aa1.13□□□□□ -2.23
CUX2-203ENST00000551604 H0YGX0 51 aa1.12□□□□□ -2.23
CUX2-203ENST00000551604 HIGD1BQ9P298 99 aa1.11□□□□□ -2.23
CUX2-203ENST00000551604 PRO1854Q9UHT4 67 aa1.11□□□□□ -2.23
CUX2-203ENST00000551604 TRBV7-4A0A0J9YYF1 115 aa1.1□□□□□ -2.23
CUX2-203ENST00000551604 SPRR2EP22531 72 aa1.1□□□□□ -2.23
CUX2-203ENST00000551604 SPRR2BP35325 72 aa1.1□□□□□ -2.23
CUX2-203ENST00000551604 SPRR2AP35326 72 aa1.1□□□□□ -2.23
CUX2-203ENST00000551604 MT1BP07438 61 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 HSD52Q0P140 79 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 PYY3Q5JQD4 70 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 WFDC13Q8IUB5 93 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 VAMP8Q9BV40 100 aa1.08□□□□□ -2.24
CUX2-203ENST00000551604 SPRR2DP22532 72 aa1.07□□□□□ -2.24
CUX2-203ENST00000551604 H1FX-AS1Q4G0G2 97 aa1.07□□□□□ -2.24
CUX2-203ENST00000551604 UQCR10Q9UDW1 63 aa1.07□□□□□ -2.24
CUX2-203ENST00000551604 COX6CP09669 75 aa1.06□□□□□ -2.24
CUX2-203ENST00000551604 LINC00846Q9NV44 126 aa1.06□□□□□ -2.24
CUX2-203ENST00000551604 MMP24-AS1A0A0U1RRL7 71 aa1.05□□□□□ -2.24
CUX2-203ENST00000551604 UQCR11O14957 56 aa1.05□□□□□ -2.24
CUX2-203ENST00000551604 NDUFB1O75438 58 aa1.05□□□□□ -2.24
CUX2-203ENST00000551604 KRTAP19-8Q3LI54 63 aa1.05□□□□□ -2.24
CUX2-203ENST00000551604 MRPL34Q9BQ48 92 aaKnown RBP1.05□□□□□ -2.24
CUX2-203ENST00000551604 A0A087WVE0 104 aa1.04□□□□□ -2.24
CUX2-203ENST00000551604 K7EQZ3 153 aa1.04□□□□□ -2.24
CUX2-203ENST00000551604 MT4P47944 62 aa1.04□□□□□ -2.24
CUX2-203ENST00000551604 NREPQ16612 68 aa1.04□□□□□ -2.24
CUX2-203ENST00000551604 SPRR2GQ9BYE4 73 aa1.03□□□□□ -2.24
CUX2-203ENST00000551604 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
CUX2-203ENST00000551604 CHKB-CPT1BH3BT56 60 aa1.02□□□□□ -2.25
CUX2-203ENST00000551604 ATXN8Q156A1 80 aa1.02□□□□□ -2.25
CUX2-203ENST00000551604 LINC01558Q9Y6Z2 57 aa1□□□□□ -2.25
CUX2-203ENST00000551604 S4R3F8 94 aa1□□□□□ -2.25
CUX2-203ENST00000551604 M0R143 59 aa0.99□□□□□ -2.25
CUX2-203ENST00000551604 MT1XP80297 61 aa0.99□□□□□ -2.25
CUX2-203ENST00000551604 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
CUX2-203ENST00000551604 K7EP34 96 aa0.98□□□□□ -2.25
CUX2-203ENST00000551604 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
CUX2-203ENST00000551604 SPCS1Q9Y6A9 102 aa0.96□□□□□ -2.26
CUX2-203ENST00000551604 UBL5Q9BZL1 73 aa0.95□□□□□ -2.26
CUX2-203ENST00000551604 CRIPTQ9P021 101 aa0.95□□□□□ -2.26
CUX2-203ENST00000551604 TRAV22A0A0B4J277 110 aa0.94□□□□□ -2.26
CUX2-203ENST00000551604 ETDBQ3ZM63 59 aa0.94□□□□□ -2.26
CUX2-203ENST00000551604 TP53AIP1Q9HCN2 124 aa0.94□□□□□ -2.26
CUX2-203ENST00000551604 H0YAA0 97 aa0.93□□□□□ -2.26
CUX2-203ENST00000551604 NDUFC1O43677 76 aa0.93□□□□□ -2.26
CUX2-203ENST00000551604 H0Y9P7 68 aa0.92□□□□□ -2.26
CUX2-203ENST00000551604 M0QZ58 72 aa0.92□□□□□ -2.26
CUX2-203ENST00000551604 ACYP1P07311 99 aa0.91□□□□□ -2.26
CUX2-203ENST00000551604 COL5A1-AS1Q5SY13 56 aa0.91□□□□□ -2.26
CUX2-203ENST00000551604 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
CUX2-203ENST00000551604 ATOX1O00244 68 aa0.88□□□□□ -2.27
CUX2-203ENST00000551604 KRTAP19-7Q3SYF9 63 aa0.88□□□□□ -2.27
CUX2-203ENST00000551604 LINC00643Q86TS7 51 aa0.87□□□□□ -2.27
CUX2-203ENST00000551604 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
CUX2-203ENST00000551604 MT-ATP8P03928 68 aa0.86□□□□□ -2.27
CUX2-203ENST00000551604 MT1EP04732 61 aa0.86□□□□□ -2.27
CUX2-203ENST00000551604 KRTAP19-5Q3LI72 72 aa0.85□□□□□ -2.27
CUX2-203ENST00000551604 ATP5EP2Q5VTU8 51 aa0.85□□□□□ -2.27
CUX2-203ENST00000551604 MT1GP13640 62 aa0.84□□□□□ -2.27
CUX2-203ENST00000551604 MT1MQ8N339 61 aa0.84□□□□□ -2.27
CUX2-203ENST00000551604 MT1LQ93083 61 aa0.82□□□□□ -2.28
CUX2-203ENST00000551604 KRTAP20-2Q3LI61 65 aa0.78□□□□□ -2.28
CUX2-203ENST00000551604 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
CUX2-203ENST00000551604 SERP2Q8N6R1 65 aa0.76□□□□□ -2.29
CUX2-203ENST00000551604 TNP1P09430 55 aa0.75□□□□□ -2.29
CUX2-203ENST00000551604 H7BZZ5 65 aa0.74□□□□□ -2.29
CUX2-203ENST00000551604 A0A1B0GU69 56 aa0.73□□□□□ -2.29
CUX2-203ENST00000551604 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
CUX2-203ENST00000551604 MT1AP04731 61 aa0.69□□□□□ -2.3
CUX2-203ENST00000551604 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
CUX2-203ENST00000551604 PRM1P04553 51 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms