RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.52
ATXN2-219ENST00000550104 KRTAP9-6A0A140TA67 174 aa5.56□□□□□ -1.52
ATXN2-219ENST00000550104 KRTAP4-3Q9BYR4 195 aa5.52□□□□□ -1.53
ATXN2-219ENST00000550104 KRTAP12-4P60329 112 aa5.51□□□□□ -1.53
ATXN2-219ENST00000550104 SPRR2EP22531 72 aa5.49□□□□□ -1.53
ATXN2-219ENST00000550104 SPRR2BP35325 72 aa5.49□□□□□ -1.53
ATXN2-219ENST00000550104 SPRR2AP35326 72 aa5.49□□□□□ -1.53
ATXN2-219ENST00000550104 LCE3BQ5TA77 95 aa5.48□□□□□ -1.53
ATXN2-219ENST00000550104 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
ATXN2-219ENST00000550104 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
ATXN2-219ENST00000550104 MT1MQ8N339 61 aa5.46□□□□□ -1.53
ATXN2-219ENST00000550104 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
ATXN2-219ENST00000550104 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
ATXN2-219ENST00000550104 SPRR2DP22532 72 aa5.32□□□□□ -1.56
ATXN2-219ENST00000550104 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
ATXN2-219ENST00000550104 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
ATXN2-219ENST00000550104 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
ATXN2-219ENST00000550104 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
ATXN2-219ENST00000550104 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
ATXN2-219ENST00000550104 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
ATXN2-219ENST00000550104 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
ATXN2-219ENST00000550104 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
ATXN2-219ENST00000550104 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.59
ATXN2-219ENST00000550104 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.6
ATXN2-219ENST00000550104 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
ATXN2-219ENST00000550104 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
ATXN2-219ENST00000550104 KRTAP9-1A8MXZ3 250 aaPredicted RBP5□□□□□ -1.61
ATXN2-219ENST00000550104 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
ATXN2-219ENST00000550104 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
ATXN2-219ENST00000550104 MT1AP04731 61 aa4.93□□□□□ -1.62
ATXN2-219ENST00000550104 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
ATXN2-219ENST00000550104 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
ATXN2-219ENST00000550104 PRM1P04553 51 aa4.89□□□□□ -1.63
ATXN2-219ENST00000550104 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
ATXN2-219ENST00000550104 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
ATXN2-219ENST00000550104 MT3P25713 68 aa4.77□□□□□ -1.65
ATXN2-219ENST00000550104 MT4P47944 62 aa4.73□□□□□ -1.65
ATXN2-219ENST00000550104 KRTAP5-9P26371 169 aa4.61□□□□□ -1.67
ATXN2-219ENST00000550104 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
ATXN2-219ENST00000550104 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
ATXN2-219ENST00000550104 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.67
ATXN2-219ENST00000550104 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
ATXN2-219ENST00000550104 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
ATXN2-219ENST00000550104 NEBP20929 6669 aa4.32□□□□□ -1.72
ATXN2-219ENST00000550104 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
ATXN2-219ENST00000550104 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
ATXN2-219ENST00000550104 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
ATXN2-219ENST00000550104 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
ATXN2-219ENST00000550104 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
ATXN2-219ENST00000550104 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
ATXN2-219ENST00000550104 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
ATXN2-219ENST00000550104 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
ATXN2-219ENST00000550104 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
ATXN2-219ENST00000550104 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
ATXN2-219ENST00000550104 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
ATXN2-219ENST00000550104 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
ATXN2-219ENST00000550104 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
ATXN2-219ENST00000550104 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
ATXN2-219ENST00000550104 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
ATXN2-219ENST00000550104 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
ATXN2-219ENST00000550104 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
ATXN2-219ENST00000550104 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
ATXN2-219ENST00000550104 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
ATXN2-219ENST00000550104 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.89
ATXN2-219ENST00000550104 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
ATXN2-219ENST00000550104 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
ATXN2-219ENST00000550104 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
ATXN2-219ENST00000550104 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
ATXN2-219ENST00000550104 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
ATXN2-219ENST00000550104 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
ATXN2-219ENST00000550104 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
ATXN2-219ENST00000550104 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
ATXN2-219ENST00000550104 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
ATXN2-219ENST00000550104 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
ATXN2-219ENST00000550104 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
ATXN2-219ENST00000550104 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
ATXN2-219ENST00000550104 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 132.2 ms