RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
PRPF40B-209ENST00000548825 MT1LQ93083 61 aa4.69□□□□□ -1.66
PRPF40B-209ENST00000548825 MT1EP04732 61 aa4.68□□□□□ -1.66
PRPF40B-209ENST00000548825 MT1GP13640 62 aa4.64□□□□□ -1.67
PRPF40B-209ENST00000548825 SYNE2Q8WXH0 6885 aaKnown RBP4.6□□□□□ -1.67
PRPF40B-209ENST00000548825 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.68
PRPF40B-209ENST00000548825 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
PRPF40B-209ENST00000548825 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
PRPF40B-209ENST00000548825 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
PRPF40B-209ENST00000548825 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
PRPF40B-209ENST00000548825 MT1MQ8N339 61 aa4.41□□□□□ -1.7
PRPF40B-209ENST00000548825 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
PRPF40B-209ENST00000548825 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.7
PRPF40B-209ENST00000548825 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.7
PRPF40B-209ENST00000548825 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.7
PRPF40B-209ENST00000548825 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
PRPF40B-209ENST00000548825 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
PRPF40B-209ENST00000548825 KRTAP12-4P60329 112 aa4.24□□□□□ -1.73
PRPF40B-209ENST00000548825 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
PRPF40B-209ENST00000548825 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
PRPF40B-209ENST00000548825 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
PRPF40B-209ENST00000548825 SPRR2EP22531 72 aa4.1□□□□□ -1.75
PRPF40B-209ENST00000548825 SPRR2BP35325 72 aa4.1□□□□□ -1.75
PRPF40B-209ENST00000548825 SPRR2AP35326 72 aa4.1□□□□□ -1.75
PRPF40B-209ENST00000548825 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
PRPF40B-209ENST00000548825 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
PRPF40B-209ENST00000548825 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
PRPF40B-209ENST00000548825 SPRR2DP22532 72 aa3.89□□□□□ -1.79
PRPF40B-209ENST00000548825 MT1AP04731 61 aa3.87□□□□□ -1.79
PRPF40B-209ENST00000548825 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
PRPF40B-209ENST00000548825 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
PRPF40B-209ENST00000548825 PRM1P04553 51 aa3.76□□□□□ -1.81
PRPF40B-209ENST00000548825 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
PRPF40B-209ENST00000548825 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
PRPF40B-209ENST00000548825 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
PRPF40B-209ENST00000548825 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
PRPF40B-209ENST00000548825 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
PRPF40B-209ENST00000548825 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
PRPF40B-209ENST00000548825 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
PRPF40B-209ENST00000548825 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
PRPF40B-209ENST00000548825 MT4P47944 62 aa3.64□□□□□ -1.83
PRPF40B-209ENST00000548825 MT3P25713 68 aa3.56□□□□□ -1.84
PRPF40B-209ENST00000548825 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
PRPF40B-209ENST00000548825 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
PRPF40B-209ENST00000548825 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
PRPF40B-209ENST00000548825 NEBP20929 6669 aa3.46□□□□□ -1.86
PRPF40B-209ENST00000548825 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
PRPF40B-209ENST00000548825 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.87
PRPF40B-209ENST00000548825 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PRPF40B-209ENST00000548825 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
PRPF40B-209ENST00000548825 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
PRPF40B-209ENST00000548825 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
PRPF40B-209ENST00000548825 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
PRPF40B-209ENST00000548825 LCE4AQ5TA78 99 aa3.07□□□□□ -1.92
PRPF40B-209ENST00000548825 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.93
PRPF40B-209ENST00000548825 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
PRPF40B-209ENST00000548825 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
PRPF40B-209ENST00000548825 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
PRPF40B-209ENST00000548825 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
PRPF40B-209ENST00000548825 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
PRPF40B-209ENST00000548825 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
PRPF40B-209ENST00000548825 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
PRPF40B-209ENST00000548825 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
PRPF40B-209ENST00000548825 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
PRPF40B-209ENST00000548825 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
PRPF40B-209ENST00000548825 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
PRPF40B-209ENST00000548825 LCE1CQ5T751 118 aa2.57□□□□□ -2
PRPF40B-209ENST00000548825 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
PRPF40B-209ENST00000548825 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PRPF40B-209ENST00000548825 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
PRPF40B-209ENST00000548825 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PRPF40B-209ENST00000548825 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
PRPF40B-209ENST00000548825 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
PRPF40B-209ENST00000548825 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
PRPF40B-209ENST00000548825 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
PRPF40B-209ENST00000548825 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PRPF40B-209ENST00000548825 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 93.3 ms