RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KRTAP19-6Q3LI70 58 aa4.49□□□□□ -1.69
SCAF11-209ENST00000547018 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
SCAF11-209ENST00000547018 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
SCAF11-209ENST00000547018 MT1EP04732 61 aa4.45□□□□□ -1.7
SCAF11-209ENST00000547018 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
SCAF11-209ENST00000547018 MT1LQ93083 61 aa4.42□□□□□ -1.7
SCAF11-209ENST00000547018 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.7
SCAF11-209ENST00000547018 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
SCAF11-209ENST00000547018 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
SCAF11-209ENST00000547018 MDN1Q9NU22 5596 aa4.34□□□□□ -1.71
SCAF11-209ENST00000547018 MT1GP13640 62 aa4.32□□□□□ -1.72
SCAF11-209ENST00000547018 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
SCAF11-209ENST00000547018 KRTAP19-3Q7Z4W3 81 aa4.21□□□□□ -1.74
SCAF11-209ENST00000547018 MT1MQ8N339 61 aa4.2□□□□□ -1.74
SCAF11-209ENST00000547018 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
SCAF11-209ENST00000547018 SPRR2EP22531 72 aa4.03□□□□□ -1.77
SCAF11-209ENST00000547018 SPRR2BP35325 72 aa4.03□□□□□ -1.77
SCAF11-209ENST00000547018 SPRR2AP35326 72 aa4.03□□□□□ -1.77
SCAF11-209ENST00000547018 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
SCAF11-209ENST00000547018 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
SCAF11-209ENST00000547018 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
SCAF11-209ENST00000547018 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
SCAF11-209ENST00000547018 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
SCAF11-209ENST00000547018 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
SCAF11-209ENST00000547018 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
SCAF11-209ENST00000547018 KRTAP9-6A0A140TA67 174 aa3.88□□□□□ -1.79
SCAF11-209ENST00000547018 SPRR2DP22532 72 aa3.83□□□□□ -1.8
SCAF11-209ENST00000547018 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SCAF11-209ENST00000547018 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-209ENST00000547018 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
SCAF11-209ENST00000547018 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
SCAF11-209ENST00000547018 MT1AP04731 61 aa3.66□□□□□ -1.82
SCAF11-209ENST00000547018 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
SCAF11-209ENST00000547018 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
SCAF11-209ENST00000547018 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
SCAF11-209ENST00000547018 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SCAF11-209ENST00000547018 MT4P47944 62 aa3.54□□□□□ -1.84
SCAF11-209ENST00000547018 NEBP20929 6669 aa3.54□□□□□ -1.84
SCAF11-209ENST00000547018 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SCAF11-209ENST00000547018 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SCAF11-209ENST00000547018 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
SCAF11-209ENST00000547018 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SCAF11-209ENST00000547018 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
SCAF11-209ENST00000547018 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SCAF11-209ENST00000547018 MT3P25713 68 aa3.36□□□□□ -1.87
SCAF11-209ENST00000547018 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
SCAF11-209ENST00000547018 PRM1P04553 51 aa3.3□□□□□ -1.88
SCAF11-209ENST00000547018 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
SCAF11-209ENST00000547018 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
SCAF11-209ENST00000547018 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
SCAF11-209ENST00000547018 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
SCAF11-209ENST00000547018 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
SCAF11-209ENST00000547018 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SCAF11-209ENST00000547018 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SCAF11-209ENST00000547018 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
SCAF11-209ENST00000547018 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
SCAF11-209ENST00000547018 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SCAF11-209ENST00000547018 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
SCAF11-209ENST00000547018 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
SCAF11-209ENST00000547018 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
SCAF11-209ENST00000547018 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
SCAF11-209ENST00000547018 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
SCAF11-209ENST00000547018 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-209ENST00000547018 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
SCAF11-209ENST00000547018 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
SCAF11-209ENST00000547018 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
SCAF11-209ENST00000547018 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
SCAF11-209ENST00000547018 KRTAP5-8O75690 187 aa2.53□□□□□ -2
SCAF11-209ENST00000547018 KRTAP5-10Q6L8G5 202 aa2.51□□□□□ -2.01
SCAF11-209ENST00000547018 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SCAF11-209ENST00000547018 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SCAF11-209ENST00000547018 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SCAF11-209ENST00000547018 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
SCAF11-209ENST00000547018 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
SCAF11-209ENST00000547018 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
SCAF11-209ENST00000547018 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SCAF11-209ENST00000547018 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SCAF11-209ENST00000547018 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 102.4 ms