RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
SKP2-208ENST00000546211 KRTAP6-3Q3LI67 103 aa6.82□□□□□ -1.32
SKP2-208ENST00000546211 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
SKP2-208ENST00000546211 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
SKP2-208ENST00000546211 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
SKP2-208ENST00000546211 MT1GP13640 62 aa6.76□□□□□ -1.33
SKP2-208ENST00000546211 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
SKP2-208ENST00000546211 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
SKP2-208ENST00000546211 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
SKP2-208ENST00000546211 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
SKP2-208ENST00000546211 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
SKP2-208ENST00000546211 LCE1AQ5T7P2 110 aa6.67□□□□□ -1.34
SKP2-208ENST00000546211 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
SKP2-208ENST00000546211 MT1MQ8N339 61 aa6.66□□□□□ -1.34
SKP2-208ENST00000546211 SPRR2EP22531 72 aa6.65□□□□□ -1.34
SKP2-208ENST00000546211 SPRR2BP35325 72 aa6.65□□□□□ -1.34
SKP2-208ENST00000546211 SPRR2AP35326 72 aa6.65□□□□□ -1.34
SKP2-208ENST00000546211 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
SKP2-208ENST00000546211 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
SKP2-208ENST00000546211 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
SKP2-208ENST00000546211 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
SKP2-208ENST00000546211 SPRR2DP22532 72 aa6.41□□□□□ -1.38
SKP2-208ENST00000546211 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
SKP2-208ENST00000546211 KRTAP9-6A8MVA2 160 aa6.4□□□□□ -1.38
SKP2-208ENST00000546211 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
SKP2-208ENST00000546211 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
SKP2-208ENST00000546211 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
SKP2-208ENST00000546211 NEBP20929 6669 aa6.3□□□□□ -1.4
SKP2-208ENST00000546211 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
SKP2-208ENST00000546211 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
SKP2-208ENST00000546211 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
SKP2-208ENST00000546211 KRTAP2-3P0C7H8 128 aa5.98□□□□□ -1.45
SKP2-208ENST00000546211 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
SKP2-208ENST00000546211 KRTAP2-4Q9BYR9 128 aa5.98□□□□□ -1.45
SKP2-208ENST00000546211 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
SKP2-208ENST00000546211 MT1AP04731 61 aa5.89□□□□□ -1.47
SKP2-208ENST00000546211 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
SKP2-208ENST00000546211 KRTAP2-2Q9BYT5 123 aa5.86□□□□□ -1.47
SKP2-208ENST00000546211 KRTAP6-1Q3LI64 71 aa5.82□□□□□ -1.48
SKP2-208ENST00000546211 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
SKP2-208ENST00000546211 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
SKP2-208ENST00000546211 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.51
SKP2-208ENST00000546211 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
SKP2-208ENST00000546211 A0A0A0MQY5 61 aa5.59□□□□□ -1.52
SKP2-208ENST00000546211 MT4P47944 62 aa5.55□□□□□ -1.52
SKP2-208ENST00000546211 H3BS24 57 aa5.43□□□□□ -1.54
SKP2-208ENST00000546211 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
SKP2-208ENST00000546211 KRTAP6-2Q3LI66 62 aa5.38□□□□□ -1.55
SKP2-208ENST00000546211 MT3P25713 68 aa5.36□□□□□ -1.55
SKP2-208ENST00000546211 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
SKP2-208ENST00000546211 INE1O15225 51 aa5.24□□□□□ -1.57
SKP2-208ENST00000546211 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
SKP2-208ENST00000546211 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
SKP2-208ENST00000546211 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
SKP2-208ENST00000546211 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
SKP2-208ENST00000546211 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
SKP2-208ENST00000546211 LCE1EQ5T753 118 aa4.65□□□□□ -1.66
SKP2-208ENST00000546211 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
SKP2-208ENST00000546211 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
SKP2-208ENST00000546211 KRTAP5-1Q6L8H4 278 aa4.5□□□□□ -1.69
SKP2-208ENST00000546211 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
SKP2-208ENST00000546211 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
SKP2-208ENST00000546211 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SKP2-208ENST00000546211 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
SKP2-208ENST00000546211 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
SKP2-208ENST00000546211 MUC5ACP98088 5654 aa4.31□□□□□ -1.72
SKP2-208ENST00000546211 PRM1P04553 51 aa4.31□□□□□ -1.72
SKP2-208ENST00000546211 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
SKP2-208ENST00000546211 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
SKP2-208ENST00000546211 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
SKP2-208ENST00000546211 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SKP2-208ENST00000546211 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
SKP2-208ENST00000546211 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
SKP2-208ENST00000546211 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
SKP2-208ENST00000546211 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
SKP2-208ENST00000546211 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SKP2-208ENST00000546211 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 1021.7 ms