RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
XRCC1-202ENST00000543982 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
XRCC1-202ENST00000543982 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
XRCC1-202ENST00000543982 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
XRCC1-202ENST00000543982 MT1LQ93083 61 aa5.7□□□□□ -1.5
XRCC1-202ENST00000543982 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
XRCC1-202ENST00000543982 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
XRCC1-202ENST00000543982 SPRR2EP22531 72 aa5.6□□□□□ -1.51
XRCC1-202ENST00000543982 SPRR2BP35325 72 aa5.6□□□□□ -1.51
XRCC1-202ENST00000543982 SPRR2AP35326 72 aa5.6□□□□□ -1.51
XRCC1-202ENST00000543982 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
XRCC1-202ENST00000543982 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
XRCC1-202ENST00000543982 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
XRCC1-202ENST00000543982 KRTAP19-4Q3LI73 84 aa5.55□□□□□ -1.52
XRCC1-202ENST00000543982 NEBP20929 6669 aa5.55□□□□□ -1.52
XRCC1-202ENST00000543982 MT1GP13640 62 aa5.53□□□□□ -1.52
XRCC1-202ENST00000543982 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
XRCC1-202ENST00000543982 MT1MQ8N339 61 aa5.51□□□□□ -1.53
XRCC1-202ENST00000543982 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
XRCC1-202ENST00000543982 SPRR2DP22532 72 aa5.39□□□□□ -1.55
XRCC1-202ENST00000543982 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
XRCC1-202ENST00000543982 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
XRCC1-202ENST00000543982 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
XRCC1-202ENST00000543982 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
XRCC1-202ENST00000543982 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
XRCC1-202ENST00000543982 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
XRCC1-202ENST00000543982 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.6
XRCC1-202ENST00000543982 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
XRCC1-202ENST00000543982 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
XRCC1-202ENST00000543982 KRTAP2-1Q9BYU5 128 aa5□□□□□ -1.61
XRCC1-202ENST00000543982 INE1O15225 51 aa4.98□□□□□ -1.61
XRCC1-202ENST00000543982 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
XRCC1-202ENST00000543982 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.64
XRCC1-202ENST00000543982 MT1AP04731 61 aa4.81□□□□□ -1.64
XRCC1-202ENST00000543982 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
XRCC1-202ENST00000543982 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
XRCC1-202ENST00000543982 MT4P47944 62 aa4.73□□□□□ -1.65
XRCC1-202ENST00000543982 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
XRCC1-202ENST00000543982 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
XRCC1-202ENST00000543982 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
XRCC1-202ENST00000543982 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.67
XRCC1-202ENST00000543982 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
XRCC1-202ENST00000543982 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
XRCC1-202ENST00000543982 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
XRCC1-202ENST00000543982 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
XRCC1-202ENST00000543982 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
XRCC1-202ENST00000543982 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
XRCC1-202ENST00000543982 MT3P25713 68 aa4.34□□□□□ -1.71
XRCC1-202ENST00000543982 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
XRCC1-202ENST00000543982 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
XRCC1-202ENST00000543982 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
XRCC1-202ENST00000543982 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
XRCC1-202ENST00000543982 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
XRCC1-202ENST00000543982 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
XRCC1-202ENST00000543982 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
XRCC1-202ENST00000543982 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
XRCC1-202ENST00000543982 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
XRCC1-202ENST00000543982 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
XRCC1-202ENST00000543982 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
XRCC1-202ENST00000543982 KRTAP5-7Q6L8G8 165 aa3.7□□□□□ -1.82
XRCC1-202ENST00000543982 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
XRCC1-202ENST00000543982 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
XRCC1-202ENST00000543982 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
XRCC1-202ENST00000543982 PRM1P04553 51 aa3.53□□□□□ -1.84
XRCC1-202ENST00000543982 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
XRCC1-202ENST00000543982 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
XRCC1-202ENST00000543982 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
XRCC1-202ENST00000543982 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
XRCC1-202ENST00000543982 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
XRCC1-202ENST00000543982 KRTAP5-11Q6L8G4 156 aa3.16□□□□□ -1.9
XRCC1-202ENST00000543982 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
XRCC1-202ENST00000543982 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
XRCC1-202ENST00000543982 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
XRCC1-202ENST00000543982 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
XRCC1-202ENST00000543982 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
XRCC1-202ENST00000543982 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.05
XRCC1-202ENST00000543982 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 87.3 ms