RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
SLC12A4-204ENST00000541864 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
SLC12A4-204ENST00000541864 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
SLC12A4-204ENST00000541864 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
SLC12A4-204ENST00000541864 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
SLC12A4-204ENST00000541864 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
SLC12A4-204ENST00000541864 MT1EP04732 61 aa3.97□□□□□ -1.77
SLC12A4-204ENST00000541864 MT1GP13640 62 aa3.97□□□□□ -1.77
SLC12A4-204ENST00000541864 MT1LQ93083 61 aa3.97□□□□□ -1.77
SLC12A4-204ENST00000541864 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
SLC12A4-204ENST00000541864 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
SLC12A4-204ENST00000541864 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
SLC12A4-204ENST00000541864 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
SLC12A4-204ENST00000541864 KRTAP2-2Q9BYT5 123 aa3.78□□□□□ -1.8
SLC12A4-204ENST00000541864 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP19-3Q7Z4W3 81 aa3.75□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
SLC12A4-204ENST00000541864 MT1MQ8N339 61 aa3.73□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP12-4P60329 112 aa3.71□□□□□ -1.81
SLC12A4-204ENST00000541864 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
SLC12A4-204ENST00000541864 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
SLC12A4-204ENST00000541864 SPRR2EP22531 72 aa3.66□□□□□ -1.82
SLC12A4-204ENST00000541864 SPRR2BP35325 72 aa3.66□□□□□ -1.82
SLC12A4-204ENST00000541864 SPRR2AP35326 72 aa3.66□□□□□ -1.82
SLC12A4-204ENST00000541864 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
SLC12A4-204ENST00000541864 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
SLC12A4-204ENST00000541864 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
SLC12A4-204ENST00000541864 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
SLC12A4-204ENST00000541864 SPRR2DP22532 72 aa3.51□□□□□ -1.85
SLC12A4-204ENST00000541864 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
SLC12A4-204ENST00000541864 LCE1FQ5T754 118 aa3.46□□□□□ -1.85
SLC12A4-204ENST00000541864 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
SLC12A4-204ENST00000541864 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.86
SLC12A4-204ENST00000541864 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
SLC12A4-204ENST00000541864 NEBP20929 6669 aa3.35□□□□□ -1.87
SLC12A4-204ENST00000541864 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SLC12A4-204ENST00000541864 PRM1P04553 51 aa3.34□□□□□ -1.87
SLC12A4-204ENST00000541864 MT1AP04731 61 aa3.32□□□□□ -1.88
SLC12A4-204ENST00000541864 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SLC12A4-204ENST00000541864 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
SLC12A4-204ENST00000541864 MT4P47944 62 aa3.22□□□□□ -1.89
SLC12A4-204ENST00000541864 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
SLC12A4-204ENST00000541864 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
SLC12A4-204ENST00000541864 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
SLC12A4-204ENST00000541864 MT3P25713 68 aa3.1□□□□□ -1.91
SLC12A4-204ENST00000541864 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
SLC12A4-204ENST00000541864 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
SLC12A4-204ENST00000541864 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SLC12A4-204ENST00000541864 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SLC12A4-204ENST00000541864 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
SLC12A4-204ENST00000541864 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SLC12A4-204ENST00000541864 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
SLC12A4-204ENST00000541864 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
SLC12A4-204ENST00000541864 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SLC12A4-204ENST00000541864 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
SLC12A4-204ENST00000541864 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
SLC12A4-204ENST00000541864 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
SLC12A4-204ENST00000541864 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
SLC12A4-204ENST00000541864 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SLC12A4-204ENST00000541864 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SLC12A4-204ENST00000541864 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
SLC12A4-204ENST00000541864 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
SLC12A4-204ENST00000541864 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SLC12A4-204ENST00000541864 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
SLC12A4-204ENST00000541864 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
SLC12A4-204ENST00000541864 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
SLC12A4-204ENST00000541864 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
SLC12A4-204ENST00000541864 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
SLC12A4-204ENST00000541864 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
SLC12A4-204ENST00000541864 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
SLC12A4-204ENST00000541864 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SLC12A4-204ENST00000541864 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
SLC12A4-204ENST00000541864 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
SLC12A4-204ENST00000541864 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SLC12A4-204ENST00000541864 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms