RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MT1LQ93083 61 aa5.37□□□□□ -1.55
CLPTM1-202ENST00000541297 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
CLPTM1-202ENST00000541297 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
CLPTM1-202ENST00000541297 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
CLPTM1-202ENST00000541297 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
CLPTM1-202ENST00000541297 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
CLPTM1-202ENST00000541297 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
CLPTM1-202ENST00000541297 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
CLPTM1-202ENST00000541297 MT1GP13640 62 aa5.17□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
CLPTM1-202ENST00000541297 MT1MQ8N339 61 aa5.15□□□□□ -1.58
CLPTM1-202ENST00000541297 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.58
CLPTM1-202ENST00000541297 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
CLPTM1-202ENST00000541297 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
CLPTM1-202ENST00000541297 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
CLPTM1-202ENST00000541297 SPRR2EP22531 72 aa5.05□□□□□ -1.6
CLPTM1-202ENST00000541297 SPRR2BP35325 72 aa5.05□□□□□ -1.6
CLPTM1-202ENST00000541297 SPRR2AP35326 72 aa5.05□□□□□ -1.6
CLPTM1-202ENST00000541297 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
CLPTM1-202ENST00000541297 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
CLPTM1-202ENST00000541297 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
CLPTM1-202ENST00000541297 SPRR2DP22532 72 aa4.86□□□□□ -1.63
CLPTM1-202ENST00000541297 NEBP20929 6669 aa4.74□□□□□ -1.65
CLPTM1-202ENST00000541297 KRTAP12-4P60329 112 aa4.66□□□□□ -1.66
CLPTM1-202ENST00000541297 LCE3BQ5TA77 95 aa4.65□□□□□ -1.66
CLPTM1-202ENST00000541297 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CLPTM1-202ENST00000541297 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
CLPTM1-202ENST00000541297 MT1AP04731 61 aa4.53□□□□□ -1.68
CLPTM1-202ENST00000541297 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
CLPTM1-202ENST00000541297 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
CLPTM1-202ENST00000541297 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.72
CLPTM1-202ENST00000541297 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
CLPTM1-202ENST00000541297 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
CLPTM1-202ENST00000541297 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
CLPTM1-202ENST00000541297 MT4P47944 62 aa4.28□□□□□ -1.72
CLPTM1-202ENST00000541297 LCE3DQ9BYE3 92 aa4.24□□□□□ -1.73
CLPTM1-202ENST00000541297 KRTAP4-6Q9BYQ5 205 aa4.23□□□□□ -1.73
CLPTM1-202ENST00000541297 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
CLPTM1-202ENST00000541297 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
CLPTM1-202ENST00000541297 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
CLPTM1-202ENST00000541297 PRM1P04553 51 aa4.15□□□□□ -1.74
CLPTM1-202ENST00000541297 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
CLPTM1-202ENST00000541297 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
CLPTM1-202ENST00000541297 MT3P25713 68 aa4.1□□□□□ -1.75
CLPTM1-202ENST00000541297 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
CLPTM1-202ENST00000541297 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
CLPTM1-202ENST00000541297 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CLPTM1-202ENST00000541297 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
CLPTM1-202ENST00000541297 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
CLPTM1-202ENST00000541297 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CLPTM1-202ENST00000541297 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
CLPTM1-202ENST00000541297 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
CLPTM1-202ENST00000541297 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CLPTM1-202ENST00000541297 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CLPTM1-202ENST00000541297 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
CLPTM1-202ENST00000541297 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
CLPTM1-202ENST00000541297 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
CLPTM1-202ENST00000541297 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CLPTM1-202ENST00000541297 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
CLPTM1-202ENST00000541297 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
CLPTM1-202ENST00000541297 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
CLPTM1-202ENST00000541297 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
CLPTM1-202ENST00000541297 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CLPTM1-202ENST00000541297 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CLPTM1-202ENST00000541297 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CLPTM1-202ENST00000541297 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
CLPTM1-202ENST00000541297 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CLPTM1-202ENST00000541297 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
CLPTM1-202ENST00000541297 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CLPTM1-202ENST00000541297 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
CLPTM1-202ENST00000541297 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CLPTM1-202ENST00000541297 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CLPTM1-202ENST00000541297 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 72.4 ms