RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

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Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 M0R2T5 61 aa2.46□□□□□ -2.02
MRE11-209ENST00000540013 NDUFB1O75438 58 aa2.44□□□□□ -2.02
MRE11-209ENST00000540013 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
MRE11-209ENST00000540013 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
MRE11-209ENST00000540013 A0A1B0GU69 56 aa2.39□□□□□ -2.03
MRE11-209ENST00000540013 ATXN8Q156A1 80 aa2.38□□□□□ -2.03
MRE11-209ENST00000540013 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.03
MRE11-209ENST00000540013 MT2AP02795 61 aa2.33□□□□□ -2.04
MRE11-209ENST00000540013 NREPQ16612 68 aa2.33□□□□□ -2.04
MRE11-209ENST00000540013 MT1FP04733 61 aa2.31□□□□□ -2.04
MRE11-209ENST00000540013 USH2AO75445 5202 aa2.31□□□□□ -2.04
MRE11-209ENST00000540013 MMP24-AS1A0A0U1RRL7 71 aa2.3□□□□□ -2.04
MRE11-209ENST00000540013 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
MRE11-209ENST00000540013 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
MRE11-209ENST00000540013 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
MRE11-209ENST00000540013 K7EQZ3 153 aa2.29□□□□□ -2.04
MRE11-209ENST00000540013 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
MRE11-209ENST00000540013 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
MRE11-209ENST00000540013 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
MRE11-209ENST00000540013 FCGBPQ9Y6R7 5405 aaPredicted RBP2.25□□□□□ -2.05
MRE11-209ENST00000540013 UBL5Q9BZL1 73 aa2.23□□□□□ -2.05
MRE11-209ENST00000540013 KRTAP19-6Q3LI70 58 aa2.21□□□□□ -2.06
MRE11-209ENST00000540013 TP53AIP1Q9HCN2 124 aa2.18□□□□□ -2.06
MRE11-209ENST00000540013 S4R3F8 94 aa2.18□□□□□ -2.06
MRE11-209ENST00000540013 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
MRE11-209ENST00000540013 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
MRE11-209ENST00000540013 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
MRE11-209ENST00000540013 C10orf95Q9H7T3 257 aa2.12□□□□□ -2.07
MRE11-209ENST00000540013 CRIPTQ9P021 101 aa2.12□□□□□ -2.07
MRE11-209ENST00000540013 MT1BP07438 61 aa2.11□□□□□ -2.07
MRE11-209ENST00000540013 KRTAP19-8Q3LI54 63 aa2.11□□□□□ -2.07
MRE11-209ENST00000540013 H0YAA0 97 aa2.06□□□□□ -2.08
MRE11-209ENST00000540013 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
MRE11-209ENST00000540013 MACF1Q9UPN3 7388 aaKnown RBP2.06□□□□□ -2.08
MRE11-209ENST00000540013 A0A0D9SG42 100 aa2.05□□□□□ -2.08
MRE11-209ENST00000540013 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
MRE11-209ENST00000540013 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
MRE11-209ENST00000540013 KMT2DO14686 5537 aa1.99□□□□□ -2.09
MRE11-209ENST00000540013 M0QZ58 72 aa1.98□□□□□ -2.09
MRE11-209ENST00000540013 MT1XP80297 61 aa1.98□□□□□ -2.09
MRE11-209ENST00000540013 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
MRE11-209ENST00000540013 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
MRE11-209ENST00000540013 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
MRE11-209ENST00000540013 SPRR2EP22531 72 aa1.93□□□□□ -2.1
MRE11-209ENST00000540013 SPRR2BP35325 72 aa1.93□□□□□ -2.1
MRE11-209ENST00000540013 SPRR2AP35326 72 aa1.93□□□□□ -2.1
MRE11-209ENST00000540013 KRTAP8-1Q8IUC2 63 aa1.93□□□□□ -2.1
MRE11-209ENST00000540013 KRTAP2-3P0C7H8 128 aa1.91□□□□□ -2.1
MRE11-209ENST00000540013 KRTAP2-4Q9BYR9 128 aa1.91□□□□□ -2.1
MRE11-209ENST00000540013 NEBP20929 6669 aa1.9□□□□□ -2.1
MRE11-209ENST00000540013 SPRR2DP22532 72 aa1.86□□□□□ -2.11
MRE11-209ENST00000540013 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
MRE11-209ENST00000540013 KRTAP19-7Q3SYF9 63 aa1.77□□□□□ -2.13
MRE11-209ENST00000540013 MT1EP04732 61 aa1.76□□□□□ -2.13
MRE11-209ENST00000540013 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
MRE11-209ENST00000540013 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
MRE11-209ENST00000540013 MT1GP13640 62 aa1.7□□□□□ -2.14
MRE11-209ENST00000540013 TNP1P09430 55 aa1.68□□□□□ -2.14
MRE11-209ENST00000540013 MT1MQ8N339 61 aa1.68□□□□□ -2.14
MRE11-209ENST00000540013 MT1LQ93083 61 aa1.68□□□□□ -2.14
MRE11-209ENST00000540013 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
MRE11-209ENST00000540013 MT4P47944 62 aa1.62□□□□□ -2.15
MRE11-209ENST00000540013 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
MRE11-209ENST00000540013 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
MRE11-209ENST00000540013 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
MRE11-209ENST00000540013 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
MRE11-209ENST00000540013 SYNE1Q8NF91 8797 aaKnown RBP1.43□□□□□ -2.18
MRE11-209ENST00000540013 MT1AP04731 61 aa1.43□□□□□ -2.18
MRE11-209ENST00000540013 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
MRE11-209ENST00000540013 KRTAP6-2Q3LI66 62 aa1.35□□□□□ -2.19
MRE11-209ENST00000540013 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
MRE11-209ENST00000540013 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
MRE11-209ENST00000540013 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
MRE11-209ENST00000540013 PRM1P04553 51 aa1.15□□□□□ -2.23
MRE11-209ENST00000540013 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
MRE11-209ENST00000540013 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
MRE11-209ENST00000540013 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 147.6 ms