RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 SPRR2FQ96RM1 72 aa9.13□□□□□ -0.95
KLHL42-202ENST00000539176 LCE3CQ5T5A8 94 aa9.11□□□□□ -0.95
KLHL42-202ENST00000539176 MUC12Q9UKN1 5478 aa9.07□□□□□ -0.96
KLHL42-202ENST00000539176 MT1LQ93083 61 aa9□□□□□ -0.97
KLHL42-202ENST00000539176 KRTAP5-9P26371 169 aa8.98□□□□□ -0.97
KLHL42-202ENST00000539176 KRTAP6-3Q3LI67 103 aa8.89□□□□□ -0.99
KLHL42-202ENST00000539176 KRTAP19-3Q7Z4W3 81 aa8.83□□□□□ -1
KLHL42-202ENST00000539176 KRTAP4-7Q9BYR0 210 aa8.81□□□□□ -1
KLHL42-202ENST00000539176 MDN1Q9NU22 5596 aa8.78□□□□□ -1
KLHL42-202ENST00000539176 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
KLHL42-202ENST00000539176 LCE1AQ5T7P2 110 aa8.72□□□□□ -1.01
KLHL42-202ENST00000539176 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
KLHL42-202ENST00000539176 MT1GP13640 62 aa8.7□□□□□ -1.02
KLHL42-202ENST00000539176 SPRR2EP22531 72 aa8.69□□□□□ -1.02
KLHL42-202ENST00000539176 SPRR2BP35325 72 aa8.69□□□□□ -1.02
KLHL42-202ENST00000539176 SPRR2AP35326 72 aa8.69□□□□□ -1.02
KLHL42-202ENST00000539176 LCE5AQ5TCM9 118 aa8.69□□□□□ -1.02
KLHL42-202ENST00000539176 MT1MQ8N339 61 aa8.67□□□□□ -1.02
KLHL42-202ENST00000539176 KRTAP4-3Q9BYR4 195 aa8.61□□□□□ -1.03
KLHL42-202ENST00000539176 KRTAP9-6A8MVA2 160 aa8.59□□□□□ -1.03
KLHL42-202ENST00000539176 SPRR2DP22532 72 aa8.36□□□□□ -1.07
KLHL42-202ENST00000539176 NEBP20929 6669 aa8.33□□□□□ -1.08
KLHL42-202ENST00000539176 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
KLHL42-202ENST00000539176 LOC100996750A0A140TA64 210 aa8.27□□□□□ -1.09
KLHL42-202ENST00000539176 KRTAP2-3P0C7H8 128 aa8.21□□□□□ -1.09
KLHL42-202ENST00000539176 KRTAP2-4Q9BYR9 128 aa8.21□□□□□ -1.09
KLHL42-202ENST00000539176 KRTAP2-1Q9BYU5 128 aa8.21□□□□□ -1.09
KLHL42-202ENST00000539176 INE1O15225 51 aa8.09□□□□□ -1.11
KLHL42-202ENST00000539176 LCE3BQ5TA77 95 aa8.04□□□□□ -1.12
KLHL42-202ENST00000539176 KRTAP5-5Q701N2 237 aaPredicted RBP7.8□□□□□ -1.16
KLHL42-202ENST00000539176 KRTAP20-1Q3LI63 56 aa7.72□□□□□ -1.17
KLHL42-202ENST00000539176 KRTAP2-2Q9BYT5 123 aa7.62□□□□□ -1.19
KLHL42-202ENST00000539176 MT1AP04731 61 aa7.62□□□□□ -1.19
KLHL42-202ENST00000539176 KRTAP6-1Q3LI64 71 aa7.62□□□□□ -1.19
KLHL42-202ENST00000539176 KRTAP5-4Q6L8H1 288 aa7.49□□□□□ -1.21
KLHL42-202ENST00000539176 SYNE1Q8NF91 8797 aaKnown RBP7.4□□□□□ -1.23
KLHL42-202ENST00000539176 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
KLHL42-202ENST00000539176 MT4P47944 62 aa7.32□□□□□ -1.24
KLHL42-202ENST00000539176 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
KLHL42-202ENST00000539176 KRTAP4-6Q9BYQ5 205 aa7.25□□□□□ -1.25
KLHL42-202ENST00000539176 KRTAP9-4Q9BYQ2 154 aa7.24□□□□□ -1.25
KLHL42-202ENST00000539176 KRTAP12-4P60329 112 aa7.24□□□□□ -1.25
KLHL42-202ENST00000539176 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
KLHL42-202ENST00000539176 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
KLHL42-202ENST00000539176 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
KLHL42-202ENST00000539176 KRTAP6-2Q3LI66 62 aa7.03□□□□□ -1.28
KLHL42-202ENST00000539176 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
KLHL42-202ENST00000539176 MT3P25713 68 aa6.87□□□□□ -1.31
KLHL42-202ENST00000539176 LCE3EQ5T5B0 92 aa6.79□□□□□ -1.32
KLHL42-202ENST00000539176 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
KLHL42-202ENST00000539176 KRTAP5-2Q701N4 177 aa6.77□□□□□ -1.33
KLHL42-202ENST00000539176 OBSCNQ5VST9 7968 aa6.44□□□□□ -1.38
KLHL42-202ENST00000539176 AHNAK2Q8IVF2 5795 aa6.35□□□□□ -1.39
KLHL42-202ENST00000539176 GPR98Q8WXG9 6306 aa6.2□□□□□ -1.42
KLHL42-202ENST00000539176 PRM1P04553 51 aa6.13□□□□□ -1.43
KLHL42-202ENST00000539176 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
KLHL42-202ENST00000539176 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
KLHL42-202ENST00000539176 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
KLHL42-202ENST00000539176 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
KLHL42-202ENST00000539176 KRTAP5-1Q6L8H4 278 aa5.9□□□□□ -1.46
KLHL42-202ENST00000539176 LCE1BQ5T7P3 118 aa5.73□□□□□ -1.49
KLHL42-202ENST00000539176 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
KLHL42-202ENST00000539176 KRTAP4-2Q9BYR5 136 aa5.65□□□□□ -1.5
KLHL42-202ENST00000539176 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
KLHL42-202ENST00000539176 LCE1CQ5T751 118 aa5.57□□□□□ -1.52
KLHL42-202ENST00000539176 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
KLHL42-202ENST00000539176 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
KLHL42-202ENST00000539176 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
KLHL42-202ENST00000539176 KRTAP21-2Q3LI59 83 aa4.96□□□□□ -1.62
KLHL42-202ENST00000539176 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
KLHL42-202ENST00000539176 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
KLHL42-202ENST00000539176 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
KLHL42-202ENST00000539176 KRTAP4-4Q9BYR3 166 aa4.53□□□□□ -1.68
KLHL42-202ENST00000539176 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
KLHL42-202ENST00000539176 PHGR1C9JFL3 82 aa4.25□□□□□ -1.73
KLHL42-202ENST00000539176 KRTAP21-1Q3LI58 79 aa3.86□□□□□ -1.79
KLHL42-202ENST00000539176 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
KLHL42-202ENST00000539176 MUC16Q8WXI7 14507 aa2.76□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 171.8 ms