RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
CDH5-202ENST00000539168 MT1EP04732 61 aa7.35□□□□□ -1.23
CDH5-202ENST00000539168 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
CDH5-202ENST00000539168 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
CDH5-202ENST00000539168 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
CDH5-202ENST00000539168 MT1LQ93083 61 aa7.22□□□□□ -1.25
CDH5-202ENST00000539168 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
CDH5-202ENST00000539168 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
CDH5-202ENST00000539168 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
CDH5-202ENST00000539168 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
CDH5-202ENST00000539168 KRTAP19-3Q7Z4W3 81 aa7.08□□□□□ -1.28
CDH5-202ENST00000539168 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
CDH5-202ENST00000539168 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
CDH5-202ENST00000539168 MT1GP13640 62 aa7.06□□□□□ -1.28
CDH5-202ENST00000539168 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
CDH5-202ENST00000539168 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
CDH5-202ENST00000539168 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
CDH5-202ENST00000539168 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
CDH5-202ENST00000539168 MT1MQ8N339 61 aa6.92□□□□□ -1.3
CDH5-202ENST00000539168 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
CDH5-202ENST00000539168 SYNE2Q8WXH0 6885 aaKnown RBP6.89□□□□□ -1.31
CDH5-202ENST00000539168 A0A0A0MQY5 61 aa6.85□□□□□ -1.31
CDH5-202ENST00000539168 MUC12Q9UKN1 5478 aa6.84□□□□□ -1.31
CDH5-202ENST00000539168 LCE1AQ5T7P2 110 aa6.81□□□□□ -1.32
CDH5-202ENST00000539168 SPRR2EP22531 72 aa6.76□□□□□ -1.33
CDH5-202ENST00000539168 SPRR2BP35325 72 aa6.76□□□□□ -1.33
CDH5-202ENST00000539168 SPRR2AP35326 72 aa6.76□□□□□ -1.33
CDH5-202ENST00000539168 KRTAP9-6A8MVA2 160 aa6.72□□□□□ -1.33
CDH5-202ENST00000539168 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
CDH5-202ENST00000539168 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
CDH5-202ENST00000539168 SPRR2DP22532 72 aa6.52□□□□□ -1.37
CDH5-202ENST00000539168 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
CDH5-202ENST00000539168 NEBP20929 6669 aa6.38□□□□□ -1.39
CDH5-202ENST00000539168 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
CDH5-202ENST00000539168 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
CDH5-202ENST00000539168 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
CDH5-202ENST00000539168 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
CDH5-202ENST00000539168 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
CDH5-202ENST00000539168 MT1AP04731 61 aa6.17□□□□□ -1.42
CDH5-202ENST00000539168 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
CDH5-202ENST00000539168 INE1O15225 51 aa6.05□□□□□ -1.44
CDH5-202ENST00000539168 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
CDH5-202ENST00000539168 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
CDH5-202ENST00000539168 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
CDH5-202ENST00000539168 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
CDH5-202ENST00000539168 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
CDH5-202ENST00000539168 MT3P25713 68 aa5.62□□□□□ -1.51
CDH5-202ENST00000539168 MT4P47944 62 aa5.6□□□□□ -1.51
CDH5-202ENST00000539168 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
CDH5-202ENST00000539168 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
CDH5-202ENST00000539168 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
CDH5-202ENST00000539168 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
CDH5-202ENST00000539168 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
CDH5-202ENST00000539168 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
CDH5-202ENST00000539168 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
CDH5-202ENST00000539168 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
CDH5-202ENST00000539168 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.62
CDH5-202ENST00000539168 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
CDH5-202ENST00000539168 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.78□□□□□ -1.64
CDH5-202ENST00000539168 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
CDH5-202ENST00000539168 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
CDH5-202ENST00000539168 PRM1P04553 51 aa4.63□□□□□ -1.67
CDH5-202ENST00000539168 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
CDH5-202ENST00000539168 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CDH5-202ENST00000539168 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
CDH5-202ENST00000539168 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
CDH5-202ENST00000539168 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
CDH5-202ENST00000539168 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
CDH5-202ENST00000539168 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
CDH5-202ENST00000539168 MUC5BQ9HC84 5762 aaPredicted RBP4.07□□□□□ -1.76
CDH5-202ENST00000539168 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
CDH5-202ENST00000539168 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CDH5-202ENST00000539168 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
CDH5-202ENST00000539168 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
CDH5-202ENST00000539168 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
CDH5-202ENST00000539168 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CDH5-202ENST00000539168 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 135.3 ms