RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
PXN-208ENST00000538144 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
PXN-208ENST00000538144 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
PXN-208ENST00000538144 MT1LQ93083 61 aa5.38□□□□□ -1.55
PXN-208ENST00000538144 KRTAP6-3Q3LI67 103 aa5.34□□□□□ -1.55
PXN-208ENST00000538144 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
PXN-208ENST00000538144 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
PXN-208ENST00000538144 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
PXN-208ENST00000538144 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
PXN-208ENST00000538144 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
PXN-208ENST00000538144 MT1GP13640 62 aa5.24□□□□□ -1.57
PXN-208ENST00000538144 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
PXN-208ENST00000538144 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
PXN-208ENST00000538144 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
PXN-208ENST00000538144 SPRR2EP22531 72 aa5.21□□□□□ -1.58
PXN-208ENST00000538144 SPRR2BP35325 72 aa5.21□□□□□ -1.58
PXN-208ENST00000538144 SPRR2AP35326 72 aa5.21□□□□□ -1.58
PXN-208ENST00000538144 MT1MQ8N339 61 aa5.19□□□□□ -1.58
PXN-208ENST00000538144 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
PXN-208ENST00000538144 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
PXN-208ENST00000538144 INE1O15225 51 aa5.02□□□□□ -1.61
PXN-208ENST00000538144 SPRR2DP22532 72 aa5.02□□□□□ -1.61
PXN-208ENST00000538144 NEBP20929 6669 aa4.96□□□□□ -1.62
PXN-208ENST00000538144 DSTQ03001 7570 aaKnown RBP4.96□□□□□ -1.62
PXN-208ENST00000538144 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PXN-208ENST00000538144 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
PXN-208ENST00000538144 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
PXN-208ENST00000538144 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
PXN-208ENST00000538144 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
PXN-208ENST00000538144 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
PXN-208ENST00000538144 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
PXN-208ENST00000538144 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
PXN-208ENST00000538144 MT1AP04731 61 aa4.56□□□□□ -1.68
PXN-208ENST00000538144 KRTAP6-1Q3LI64 71 aa4.55□□□□□ -1.68
PXN-208ENST00000538144 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
PXN-208ENST00000538144 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
PXN-208ENST00000538144 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
PXN-208ENST00000538144 MT4P47944 62 aa4.39□□□□□ -1.71
PXN-208ENST00000538144 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
PXN-208ENST00000538144 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
PXN-208ENST00000538144 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
PXN-208ENST00000538144 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
PXN-208ENST00000538144 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
PXN-208ENST00000538144 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
PXN-208ENST00000538144 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
PXN-208ENST00000538144 HMCN1Q96RW7 5635 aa4.19□□□□□ -1.74
PXN-208ENST00000538144 MT3P25713 68 aa4.14□□□□□ -1.75
PXN-208ENST00000538144 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
PXN-208ENST00000538144 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
PXN-208ENST00000538144 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
PXN-208ENST00000538144 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
PXN-208ENST00000538144 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
PXN-208ENST00000538144 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
PXN-208ENST00000538144 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
PXN-208ENST00000538144 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
PXN-208ENST00000538144 PRM1P04553 51 aa3.6□□□□□ -1.83
PXN-208ENST00000538144 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
PXN-208ENST00000538144 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
PXN-208ENST00000538144 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
PXN-208ENST00000538144 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
PXN-208ENST00000538144 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PXN-208ENST00000538144 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
PXN-208ENST00000538144 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
PXN-208ENST00000538144 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
PXN-208ENST00000538144 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
PXN-208ENST00000538144 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
PXN-208ENST00000538144 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
PXN-208ENST00000538144 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
PXN-208ENST00000538144 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
PXN-208ENST00000538144 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PXN-208ENST00000538144 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
PXN-208ENST00000538144 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
PXN-208ENST00000538144 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
PXN-208ENST00000538144 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
PXN-208ENST00000538144 PHGR1C9JFL3 82 aa2.55□□□□□ -2
PXN-208ENST00000538144 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
PXN-208ENST00000538144 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
PXN-208ENST00000538144 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 279.6 ms