RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 SPINT4Q6UDR6 99 aa2.68□□□□□ -1.98
TNFRSF1A-206ENST00000535038 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
TNFRSF1A-206ENST00000535038 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
TNFRSF1A-206ENST00000535038 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
TNFRSF1A-206ENST00000535038 R4GN34 69 aa2.65□□□□□ -1.99
TNFRSF1A-206ENST00000535038 MUC2Q02817 5179 aa2.59□□□□□ -2
TNFRSF1A-206ENST00000535038 RNF213Q63HN8 5207 aa2.59□□□□□ -2
TNFRSF1A-206ENST00000535038 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
TNFRSF1A-206ENST00000535038 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
TNFRSF1A-206ENST00000535038 MT1HP80294 61 aa2.5□□□□□ -2.01
TNFRSF1A-206ENST00000535038 CAMK2N1Q7Z7J9 78 aa2.49□□□□□ -2.01
TNFRSF1A-206ENST00000535038 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
TNFRSF1A-206ENST00000535038 MT2AP02795 61 aa2.47□□□□□ -2.01
TNFRSF1A-206ENST00000535038 MT1FP04733 61 aa2.47□□□□□ -2.01
TNFRSF1A-206ENST00000535038 PLAC4Q8WY50 150 aa2.47□□□□□ -2.01
TNFRSF1A-206ENST00000535038 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
TNFRSF1A-206ENST00000535038 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TNFRSF1A-206ENST00000535038 TNP1P09430 55 aa2.45□□□□□ -2.02
TNFRSF1A-206ENST00000535038 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
TNFRSF1A-206ENST00000535038 MT1BP07438 61 aa2.41□□□□□ -2.02
TNFRSF1A-206ENST00000535038 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
TNFRSF1A-206ENST00000535038 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
TNFRSF1A-206ENST00000535038 MT1XP80297 61 aa2.37□□□□□ -2.03
TNFRSF1A-206ENST00000535038 M0R2T5 61 aa2.36□□□□□ -2.03
TNFRSF1A-206ENST00000535038 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
TNFRSF1A-206ENST00000535038 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
TNFRSF1A-206ENST00000535038 KRTAP12-3P60328 96 aa2.24□□□□□ -2.05
TNFRSF1A-206ENST00000535038 USH2AO75445 5202 aa2.23□□□□□ -2.05
TNFRSF1A-206ENST00000535038 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
TNFRSF1A-206ENST00000535038 KRTAP19-5Q3LI72 72 aa2.17□□□□□ -2.06
TNFRSF1A-206ENST00000535038 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
TNFRSF1A-206ENST00000535038 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
TNFRSF1A-206ENST00000535038 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TNFRSF1A-206ENST00000535038 KMT2DO14686 5537 aa2.11□□□□□ -2.07
TNFRSF1A-206ENST00000535038 KRTAP19-6Q3LI70 58 aa2.07□□□□□ -2.08
TNFRSF1A-206ENST00000535038 MT1EP04732 61 aa2.06□□□□□ -2.08
TNFRSF1A-206ENST00000535038 INE1O15225 51 aa2.05□□□□□ -2.08
TNFRSF1A-206ENST00000535038 MT1LQ93083 61 aa2.05□□□□□ -2.08
TNFRSF1A-206ENST00000535038 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
TNFRSF1A-206ENST00000535038 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
TNFRSF1A-206ENST00000535038 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
TNFRSF1A-206ENST00000535038 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
TNFRSF1A-206ENST00000535038 MT1MQ8N339 61 aa1.92□□□□□ -2.1
TNFRSF1A-206ENST00000535038 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
TNFRSF1A-206ENST00000535038 MT1GP13640 62 aa1.9□□□□□ -2.11
TNFRSF1A-206ENST00000535038 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
TNFRSF1A-206ENST00000535038 CRCT1Q9UGL9 99 aa1.85□□□□□ -2.11
TNFRSF1A-206ENST00000535038 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
TNFRSF1A-206ENST00000535038 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
TNFRSF1A-206ENST00000535038 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
TNFRSF1A-206ENST00000535038 SPRR2FQ96RM1 72 aa1.78□□□□□ -2.12
TNFRSF1A-206ENST00000535038 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
TNFRSF1A-206ENST00000535038 MT1AP04731 61 aa1.73□□□□□ -2.13
TNFRSF1A-206ENST00000535038 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
TNFRSF1A-206ENST00000535038 MDN1Q9NU22 5596 aa1.71□□□□□ -2.14
TNFRSF1A-206ENST00000535038 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
TNFRSF1A-206ENST00000535038 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
TNFRSF1A-206ENST00000535038 SPRR2EP22531 72 aa1.64□□□□□ -2.15
TNFRSF1A-206ENST00000535038 SPRR2BP35325 72 aa1.64□□□□□ -2.15
TNFRSF1A-206ENST00000535038 SPRR2AP35326 72 aa1.64□□□□□ -2.15
TNFRSF1A-206ENST00000535038 NEBP20929 6669 aa1.64□□□□□ -2.15
TNFRSF1A-206ENST00000535038 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
TNFRSF1A-206ENST00000535038 SPRR2DP22532 72 aa1.57□□□□□ -2.16
TNFRSF1A-206ENST00000535038 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
TNFRSF1A-206ENST00000535038 PRM1P04553 51 aa1.49□□□□□ -2.17
TNFRSF1A-206ENST00000535038 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
TNFRSF1A-206ENST00000535038 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
TNFRSF1A-206ENST00000535038 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
TNFRSF1A-206ENST00000535038 MT4P47944 62 aa1.34□□□□□ -2.19
TNFRSF1A-206ENST00000535038 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
TNFRSF1A-206ENST00000535038 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
TNFRSF1A-206ENST00000535038 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
TNFRSF1A-206ENST00000535038 MUC5BQ9HC84 5762 aaPredicted RBP1.07□□□□□ -2.24
TNFRSF1A-206ENST00000535038 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
TNFRSF1A-206ENST00000535038 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
TNFRSF1A-206ENST00000535038 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
TNFRSF1A-206ENST00000535038 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
TNFRSF1A-206ENST00000535038 AHNAKQ09666 5890 aaKnown RBP0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 179.2 ms