RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 LCE3CQ5T5A8 94 aa8.42□□□□□ -1.06
PTPMT1-205ENST00000534775 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.07
PTPMT1-205ENST00000534775 KRTAP5-9P26371 169 aa8.36□□□□□ -1.07
PTPMT1-205ENST00000534775 LUZP6Q538Z0 58 aa8.33□□□□□ -1.08
PTPMT1-205ENST00000534775 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
PTPMT1-205ENST00000534775 KRTAP19-3Q7Z4W3 81 aa8.28□□□□□ -1.08
PTPMT1-205ENST00000534775 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
PTPMT1-205ENST00000534775 MT1GP13640 62 aa8.22□□□□□ -1.09
PTPMT1-205ENST00000534775 KRTAP4-7Q9BYR0 210 aa8.15□□□□□ -1.1
PTPMT1-205ENST00000534775 NDUFAF8A1L188 74 aa8.13□□□□□ -1.11
PTPMT1-205ENST00000534775 LCE5AQ5TCM9 118 aa8.11□□□□□ -1.11
PTPMT1-205ENST00000534775 MT1MQ8N339 61 aa8.11□□□□□ -1.11
PTPMT1-205ENST00000534775 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
PTPMT1-205ENST00000534775 SPRR2EP22531 72 aa8□□□□□ -1.13
PTPMT1-205ENST00000534775 SPRR2BP35325 72 aa8□□□□□ -1.13
PTPMT1-205ENST00000534775 SPRR2AP35326 72 aa8□□□□□ -1.13
PTPMT1-205ENST00000534775 MDN1Q9NU22 5596 aa7.99□□□□□ -1.13
PTPMT1-205ENST00000534775 NEBP20929 6669 aa7.95□□□□□ -1.14
PTPMT1-205ENST00000534775 KRTAP9-6A8MVA2 160 aa7.91□□□□□ -1.14
PTPMT1-205ENST00000534775 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
PTPMT1-205ENST00000534775 SPRR2DP22532 72 aa7.7□□□□□ -1.18
PTPMT1-205ENST00000534775 H3BS24 57 aa7.67□□□□□ -1.18
PTPMT1-205ENST00000534775 DSTQ03001 7570 aaKnown RBP7.54□□□□□ -1.2
PTPMT1-205ENST00000534775 KRTAP20-1Q3LI63 56 aa7.53□□□□□ -1.2
PTPMT1-205ENST00000534775 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
PTPMT1-205ENST00000534775 KRTAP2-3P0C7H8 128 aa7.41□□□□□ -1.22
PTPMT1-205ENST00000534775 KRTAP2-4Q9BYR9 128 aa7.41□□□□□ -1.22
PTPMT1-205ENST00000534775 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
PTPMT1-205ENST00000534775 KRTAP9-9Q9BYP9 154 aa7.31□□□□□ -1.24
PTPMT1-205ENST00000534775 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
PTPMT1-205ENST00000534775 KRTAP4-12Q9BQ66 201 aa7.3□□□□□ -1.24
PTPMT1-205ENST00000534775 KRTAP5-5Q701N2 237 aaPredicted RBP7.29□□□□□ -1.24
PTPMT1-205ENST00000534775 A0A0A0MQY5 61 aa7.21□□□□□ -1.26
PTPMT1-205ENST00000534775 MT1AP04731 61 aa7.2□□□□□ -1.26
PTPMT1-205ENST00000534775 KRTAP2-2Q9BYT5 123 aa7.19□□□□□ -1.26
PTPMT1-205ENST00000534775 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
PTPMT1-205ENST00000534775 LCE1DQ5T752 114 aa6.98□□□□□ -1.29
PTPMT1-205ENST00000534775 KRTAP5-4Q6L8H1 288 aa6.94□□□□□ -1.3
PTPMT1-205ENST00000534775 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
PTPMT1-205ENST00000534775 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
PTPMT1-205ENST00000534775 KRTAP4-2Q9BYR5 136 aa6.82□□□□□ -1.32
PTPMT1-205ENST00000534775 KRTAP12-4P60329 112 aa6.8□□□□□ -1.32
PTPMT1-205ENST00000534775 SYNE1Q8NF91 8797 aaKnown RBP6.8□□□□□ -1.32
PTPMT1-205ENST00000534775 INE1O15225 51 aa6.76□□□□□ -1.33
PTPMT1-205ENST00000534775 MT4P47944 62 aa6.68□□□□□ -1.34
PTPMT1-205ENST00000534775 MT3P25713 68 aa6.54□□□□□ -1.36
PTPMT1-205ENST00000534775 KRTAP6-2Q3LI66 62 aa6.54□□□□□ -1.36
PTPMT1-205ENST00000534775 KRTAP4-11Q9BYQ6 195 aa6.5□□□□□ -1.37
PTPMT1-205ENST00000534775 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
PTPMT1-205ENST00000534775 KRTAP20-2Q3LI61 65 aa6.49□□□□□ -1.37
PTPMT1-205ENST00000534775 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
PTPMT1-205ENST00000534775 LCE3DQ9BYE3 92 aa6.34□□□□□ -1.39
PTPMT1-205ENST00000534775 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
PTPMT1-205ENST00000534775 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
PTPMT1-205ENST00000534775 LCE3EQ5T5B0 92 aa6.18□□□□□ -1.42
PTPMT1-205ENST00000534775 AHNAK2Q8IVF2 5795 aa6.11□□□□□ -1.43
PTPMT1-205ENST00000534775 KRTAP5-10Q6L8G5 202 aa5.86□□□□□ -1.47
PTPMT1-205ENST00000534775 OBSCNQ5VST9 7968 aa5.86□□□□□ -1.47
PTPMT1-205ENST00000534775 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
PTPMT1-205ENST00000534775 KRTAP5-7Q6L8G8 165 aa5.58□□□□□ -1.52
PTPMT1-205ENST00000534775 KRTAP5-8O75690 187 aa5.47□□□□□ -1.53
PTPMT1-205ENST00000534775 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
PTPMT1-205ENST00000534775 PRM1P04553 51 aa5.41□□□□□ -1.54
PTPMT1-205ENST00000534775 LCE1BQ5T7P3 118 aa5.29□□□□□ -1.56
PTPMT1-205ENST00000534775 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
PTPMT1-205ENST00000534775 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
PTPMT1-205ENST00000534775 MUC5BQ9HC84 5762 aaPredicted RBP4.99□□□□□ -1.61
PTPMT1-205ENST00000534775 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
PTPMT1-205ENST00000534775 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
PTPMT1-205ENST00000534775 KRTAP21-2Q3LI59 83 aa4.64□□□□□ -1.67
PTPMT1-205ENST00000534775 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
PTPMT1-205ENST00000534775 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
PTPMT1-205ENST00000534775 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
PTPMT1-205ENST00000534775 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
PTPMT1-205ENST00000534775 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
PTPMT1-205ENST00000534775 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
PTPMT1-205ENST00000534775 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms