RNA–Protein interactions for RNA: ENST00000531432.1

PPP6R3-223, Transcript of protein phosphatase 6 regulatory subunit 3, human

TSL 3

Gene PPP6R3, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP6R3-223	ENST00000531432	FAT3	Q8TDW7	4589 aa		1.88	□□□□□ -2.11
PPP6R3-223	ENST00000531432	C9orf92	A6NGG3	77 aa		1.86	□□□□□ -2.11
PPP6R3-223	ENST00000531432	SPINK1	P00995	79 aa		1.84	□□□□□ -2.11
PPP6R3-223	ENST00000531432	SPRR1A	P35321	89 aa		1.83	□□□□□ -2.12
PPP6R3-223	ENST00000531432	H1FX-AS1	Q4G0G2	97 aa		1.83	□□□□□ -2.12
PPP6R3-223	ENST00000531432	C10orf95	Q9H7T3	257 aa		1.83	□□□□□ -2.12
PPP6R3-223	ENST00000531432	HMCN2	Q8NDA2	5059 aa		1.82	□□□□□ -2.12
PPP6R3-223	ENST00000531432	WFDC13	Q8IUB5	93 aa		1.82	□□□□□ -2.12
PPP6R3-223	ENST00000531432	LRP2	P98164	4655 aa		1.81	□□□□□ -2.12
PPP6R3-223	ENST00000531432	TNXB	P22105	4242 aa		1.81	□□□□□ -2.12
PPP6R3-223	ENST00000531432	GPR98	Q8WXG9	6306 aa		1.81	□□□□□ -2.12
PPP6R3-223	ENST00000531432		M0R2T5	61 aa		1.79	□□□□□ -2.12
PPP6R3-223	ENST00000531432	LPA	P08519	4548 aa		1.78	□□□□□ -2.12
PPP6R3-223	ENST00000531432	RPS29	P62273	56 aa	Known RBP	1.78	□□□□□ -2.12
PPP6R3-223	ENST00000531432	SPRR1B	P22528	89 aa		1.77	□□□□□ -2.13
PPP6R3-223	ENST00000531432	UBR4	Q5T4S7	5183 aa		1.76	□□□□□ -2.13
PPP6R3-223	ENST00000531432	MMP24-AS1	A0A0U1RRL7	71 aa		1.76	□□□□□ -2.13
PPP6R3-223	ENST00000531432	RNF213	Q63HN8	5207 aa		1.71	□□□□□ -2.14
PPP6R3-223	ENST00000531432	MUC17	Q685J3	4493 aa		1.68	□□□□□ -2.14
PPP6R3-223	ENST00000531432	MT1H	P80294	61 aa		1.66	□□□□□ -2.14
PPP6R3-223	ENST00000531432	FAT4	Q6V0I7	4981 aa		1.66	□□□□□ -2.14
PPP6R3-223	ENST00000531432		S4R3F8	94 aa		1.65	□□□□□ -2.15
PPP6R3-223	ENST00000531432		A0A0D9SG42	100 aa		1.62	□□□□□ -2.15
PPP6R3-223	ENST00000531432	MUC2	Q02817	5179 aa		1.62	□□□□□ -2.15
PPP6R3-223	ENST00000531432	KRTAP19-2	Q3LHN2	52 aa		1.59	□□□□□ -2.15
PPP6R3-223	ENST00000531432	MT2A	P02795	61 aa		1.55	□□□□□ -2.16
PPP6R3-223	ENST00000531432	MT1F	P04733	61 aa		1.54	□□□□□ -2.16
PPP6R3-223	ENST00000531432	FLG	P20930	4061 aa	Predicted RBP	1.52	□□□□□ -2.17
PPP6R3-223	ENST00000531432	FSIP2	Q5CZC0	6907 aa		1.49	□□□□□ -2.17
PPP6R3-223	ENST00000531432		M0QZ58	72 aa		1.46	□□□□□ -2.18
PPP6R3-223	ENST00000531432	MACF1	Q9UPN3	7388 aa	Known RBP	1.45	□□□□□ -2.18
PPP6R3-223	ENST00000531432	HMCN1	Q96RW7	5635 aa		1.44	□□□□□ -2.18
PPP6R3-223	ENST00000531432	KRTAP19-6	Q3LI70	58 aa		1.42	□□□□□ -2.18
PPP6R3-223	ENST00000531432	AHNAK	Q09666	5890 aa	Known RBP	1.42	□□□□□ -2.18
PPP6R3-223	ENST00000531432	USH2A	O75445	5202 aa		1.41	□□□□□ -2.18
PPP6R3-223	ENST00000531432	SSPO	A2VEC9	5147 aa		1.4	□□□□□ -2.19
PPP6R3-223	ENST00000531432	MT1B	P07438	61 aa		1.39	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SPRR2G	Q9BYE4	73 aa		1.39	□□□□□ -2.19
PPP6R3-223	ENST00000531432	KRTAP19-8	Q3LI54	63 aa		1.38	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SYNE2	Q8WXH0	6885 aa	Known RBP	1.37	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SPRR2F	Q96RM1	72 aa		1.36	□□□□□ -2.19
PPP6R3-223	ENST00000531432	KRTAP8-1	Q8IUC2	63 aa		1.35	□□□□□ -2.19
PPP6R3-223	ENST00000531432	MUC16	Q8WXI7	14507 aa		1.35	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SPRR2E	P22531	72 aa		1.34	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SPRR2B	P35325	72 aa		1.34	□□□□□ -2.19
PPP6R3-223	ENST00000531432	SPRR2A	P35326	72 aa		1.34	□□□□□ -2.19
PPP6R3-223	ENST00000531432	KRTAP20-1	Q3LI63	56 aa		1.33	□□□□□ -2.2
PPP6R3-223	ENST00000531432	MT1X	P80297	61 aa		1.31	□□□□□ -2.2
PPP6R3-223	ENST00000531432	KRTAP5-10	Q6L8G5	202 aa		1.31	□□□□□ -2.2
PPP6R3-223	ENST00000531432	SPRR2D	P22532	72 aa		1.3	□□□□□ -2.2
PPP6R3-223	ENST00000531432	NEB	P20929	6669 aa		1.29	□□□□□ -2.2
PPP6R3-223	ENST00000531432	TNP1	P09430	55 aa		1.29	□□□□□ -2.2
PPP6R3-223	ENST00000531432	AHNAK2	Q8IVF2	5795 aa		1.28	□□□□□ -2.2
PPP6R3-223	ENST00000531432	KRTAP2-3	P0C7H8	128 aa		1.28	□□□□□ -2.2
PPP6R3-223	ENST00000531432	KRTAP2-4	Q9BYR9	128 aa		1.28	□□□□□ -2.2
PPP6R3-223	ENST00000531432	KRTAP2-1	Q9BYU5	128 aa		1.28	□□□□□ -2.2
PPP6R3-223	ENST00000531432	DST	Q03001	7570 aa	Known RBP	1.24	□□□□□ -2.21
PPP6R3-223	ENST00000531432	MUC12	Q9UKN1	5478 aa		1.23	□□□□□ -2.21
PPP6R3-223	ENST00000531432	KMT2D	O14686	5537 aa		1.22	□□□□□ -2.21
PPP6R3-223	ENST00000531432	MDN1	Q9NU22	5596 aa		1.2	□□□□□ -2.22
PPP6R3-223	ENST00000531432	KRTAP19-5	Q3LI72	72 aa		1.19	□□□□□ -2.22
PPP6R3-223	ENST00000531432	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.17	□□□□□ -2.22
PPP6R3-223	ENST00000531432	MT1E	P04732	61 aa		1.17	□□□□□ -2.22
PPP6R3-223	ENST00000531432	KRTAP19-3	Q7Z4W3	81 aa		1.17	□□□□□ -2.22
PPP6R3-223	ENST00000531432	MT4	P47944	62 aa		1.15	□□□□□ -2.23
PPP6R3-223	ENST00000531432	KRTAP19-7	Q3SYF9	63 aa		1.14	□□□□□ -2.23
PPP6R3-223	ENST00000531432	MT1L	Q93083	61 aa		1.13	□□□□□ -2.23
PPP6R3-223	ENST00000531432	MT1G	P13640	62 aa		1.12	□□□□□ -2.23
PPP6R3-223	ENST00000531432	MT1M	Q8N339	61 aa		1.12	□□□□□ -2.23
PPP6R3-223	ENST00000531432	PRM1	P04553	51 aa		1.09	□□□□□ -2.23
PPP6R3-223	ENST00000531432	KRTAP20-2	Q3LI61	65 aa		1	□□□□□ -2.25
PPP6R3-223	ENST00000531432	MUC5AC	P98088	5654 aa		0.99	□□□□□ -2.25
PPP6R3-223	ENST00000531432	MT1A	P04731	61 aa		0.96	□□□□□ -2.26
PPP6R3-223	ENST00000531432	KRTAP6-1	Q3LI64	71 aa		0.96	□□□□□ -2.26
PPP6R3-223	ENST00000531432	SYNE1	Q8NF91	8797 aa	Known RBP	0.94	□□□□□ -2.26
PPP6R3-223	ENST00000531432	KRTAP6-2	Q3LI66	62 aa		0.93	□□□□□ -2.26
PPP6R3-223	ENST00000531432	KRTAP21-1	Q3LI58	79 aa		0.9	□□□□□ -2.27
PPP6R3-223	ENST00000531432	PHGR1	C9JFL3	82 aa		0.63	□□□□□ -2.31

Retrieved 78 of 20,778 RNA–protein pairs in 70.1 ms